The 2.0 version of rSNPBase

Variant report

Variant rs12097274
Chromosome Location chr1:95436999-95437000
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95422000-95450800 Weak transcription Cortex derived primary cultured neurospheres brain
2 chr1:95428800-95439200 Weak transcription Aorta Aorta
3 chr1:95429000-95437600 Weak transcription Right Ventricle heart
4 chr1:95429000-95439800 Weak transcription Brain Inferior Temporal Lobe brain
5 chr1:95429000-95467600 Weak transcription Stomach Smooth Muscle stomach
6 chr1:95429200-95440200 Weak transcription Fetal Intestine Small intestine
7 chr1:95429600-95437600 Weak transcription Fetal Muscle Trunk muscle
8 chr1:95435800-95438000 Enhancers Placenta Placenta
9 chr1:95436200-95437000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
10 chr1:95436200-95437200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:95436200-95437400 Enhancers iPS-20b Cell Line embryonic stem cell
12 chr1:95436200-95437600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
13 chr1:95436200-95437600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
14 chr1:95436200-95438200 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr1:95436200-95438200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:95436200-95438200 Enhancers Fetal Adrenal Gland Adrenal Gland
17 chr1:95436200-95438200 Enhancers HMEC breast
18 chr1:95436200-95438200 Enhancers NHLF lung
19 chr1:95436200-95438200 Enhancers Osteobl bone
20 chr1:95436200-95440000 Enhancers NHDF-Ad bronchial
21 chr1:95436200-95441200 Enhancers HSMM muscle
22 chr1:95436400-95437000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr1:95436400-95437200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr1:95436400-95437200 Enhancers HUES64 Cell Line embryonic stem cell
25 chr1:95436400-95437200 Enhancers iPS-15b Cell Line embryonic stem cell
26 chr1:95436400-95437200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:95436400-95437200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:95436400-95437200 Enhancers NHEK skin
29 chr1:95436400-95437400 Enhancers HUES48 Cell Line embryonic stem cell
30 chr1:95436400-95437400 Enhancers iPS-18 Cell Line embryonic stem cell
31 chr1:95436400-95437400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
32 chr1:95436400-95437600 Enhancers ES-I3 Cell Line embryonic stem cell
33 chr1:95436400-95437600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:95436400-95437600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:95436400-95437600 Flanking Active TSS Muscle Satellite Cultured Cells --
36 chr1:95436400-95437600 Enhancers Adipose Nuclei Adipose
37 chr1:95436400-95437600 Enhancers Fetal Kidney kidney
38 chr1:95436400-95437800 Enhancers Skeletal Muscle Male skeletal muscle
39 chr1:95436400-95437800 Enhancers HepG2 liver
40 chr1:95436400-95438000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:95436400-95438000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr1:95436400-95438000 Enhancers Left Ventricle heart
43 chr1:95436400-95438000 Enhancers Lung lung
44 chr1:95436400-95438000 Enhancers Skeletal Muscle Female skeletal muscle
45 chr1:95436400-95438000 Enhancers A549 lung
46 chr1:95436400-95438000 Enhancers NH-A brain
47 chr1:95436400-95438200 Enhancers Fetal Muscle Leg muscle
48 chr1:95436600-95437000 Weak transcription Right Atrium heart
49 chr1:95436600-95437000 Flanking Active TSS HSMMtube muscle
50 chr1:95436600-95437200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015