Variant report
| Variant | rs12078209 |
|---|---|
| Chromosome Location | chr1:67435413-67435414 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:67396800-67458200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr1:67396800-67459000 | Weak transcription | Esophagus | oesophagus |
| 3 | chr1:67397600-67457600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 4 | chr1:67400600-67466600 | Weak transcription | Aorta | Aorta |
| 5 | chr1:67405600-67445400 | Strong transcription | Fetal Thymus | thymus |
| 6 | chr1:67406400-67439200 | Strong transcription | Primary B cells from peripheral blood | blood |
| 7 | chr1:67406400-67455600 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 8 | chr1:67407000-67445400 | Strong transcription | Dnd41 | blood |
| 9 | chr1:67408200-67448000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 10 | chr1:67408200-67450200 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 11 | chr1:67409400-67446400 | Weak transcription | Brain Angular Gyrus | brain |
| 12 | chr1:67409400-67447600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 13 | chr1:67410600-67446400 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 14 | chr1:67410600-67453200 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 15 | chr1:67411000-67455000 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 16 | chr1:67411200-67454800 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 17 | chr1:67411200-67456200 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 18 | chr1:67412800-67440600 | Weak transcription | Psoas Muscle | Psoas |
| 19 | chr1:67413400-67447000 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 20 | chr1:67413400-67456400 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 21 | chr1:67413600-67446400 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 22 | chr1:67414600-67462000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 23 | chr1:67416400-67439000 | Strong transcription | Primary B cells from cord blood | blood |
| 24 | chr1:67416600-67446400 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 25 | chr1:67417000-67462000 | Weak transcription | Right Ventricle | heart |
| 26 | chr1:67417400-67446200 | Strong transcription | HSMM | muscle |
| 27 | chr1:67418000-67446400 | Strong transcription | Osteobl | bone |
| 28 | chr1:67418200-67447000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 29 | chr1:67418600-67442800 | Weak transcription | Spleen | Spleen |
| 30 | chr1:67419000-67440000 | Weak transcription | Brain Germinal Matrix | brain |
| 31 | chr1:67420200-67444200 | Weak transcription | Fetal Heart | heart |
| 32 | chr1:67420600-67467000 | Weak transcription | Gastric | stomach |
| 33 | chr1:67420800-67446200 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 34 | chr1:67420800-67446600 | Weak transcription | Stomach Mucosa | stomach |
| 35 | chr1:67421000-67441400 | Strong transcription | Adipose Nuclei | Adipose |
| 36 | chr1:67421600-67439000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 37 | chr1:67424200-67438200 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 38 | chr1:67425400-67437200 | Strong transcription | Fetal Intestine Large | intestine |
| 39 | chr1:67426800-67446000 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 40 | chr1:67427200-67455200 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 41 | chr1:67427400-67446000 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 42 | chr1:67427400-67446400 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 43 | chr1:67427600-67446000 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 44 | chr1:67428200-67445000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 45 | chr1:67428400-67435600 | Weak transcription | Colon Smooth Muscle | Colon |
| 46 | chr1:67428400-67438600 | Weak transcription | NHLF | lung |
| 47 | chr1:67428800-67442000 | Weak transcription | HepG2 | liver |
| 48 | chr1:67429600-67442600 | Weak transcription | Brain Substantia Nigra | brain |
| 49 | chr1:67430600-67438400 | Strong transcription | K562 | blood |
| 50 | chr1:67430600-67446000 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
