The 2.0 version of rSNPBase

Variant report

Variant rs12098340
Chromosome Location chr10:97827487-97827488
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97804600-97831800 Weak transcription Stomach Mucosa stomach
2 chr10:97816400-97831400 Weak transcription Right Atrium heart
3 chr10:97818000-97834200 Weak transcription Placenta Amnion Placenta Amnion
4 chr10:97818000-97842400 Weak transcription Fetal Heart heart
5 chr10:97818000-97849200 Weak transcription Psoas Muscle Psoas
6 chr10:97818000-97849400 Weak transcription Pancreas Pancrea
7 chr10:97818000-97849400 Weak transcription Spleen Spleen
8 chr10:97818200-97832800 Weak transcription HMEC breast
9 chr10:97818200-97833200 Weak transcription NHEK skin
10 chr10:97818200-97833800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr10:97818200-97849000 Weak transcription Brain Substantia Nigra brain
12 chr10:97818400-97849200 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr10:97818400-97849400 Weak transcription Right Ventricle heart
14 chr10:97819200-97839000 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr10:97819400-97833400 Weak transcription NHLF lung
16 chr10:97819400-97849200 Weak transcription Brain Inferior Temporal Lobe brain
17 chr10:97819600-97828600 Weak transcription H9 Cell Line embryonic stem cell
18 chr10:97819600-97832600 Weak transcription NHDF-Ad bronchial
19 chr10:97819600-97840600 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr10:97819600-97848000 Weak transcription HepG2 liver
21 chr10:97819600-97849000 Weak transcription Stomach Smooth Muscle stomach
22 chr10:97819600-97849200 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr10:97819600-97849200 Weak transcription Brain Hippocampus Middle brain
24 chr10:97819600-97849400 Weak transcription Ovary ovary
25 chr10:97819800-97834400 Weak transcription Fetal Intestine Large intestine
26 chr10:97819800-97841400 Weak transcription Liver Liver
27 chr10:97819800-97849200 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr10:97819800-97849200 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr10:97820200-97833400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr10:97820200-97833600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr10:97820200-97849000 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr10:97820400-97842000 Weak transcription Primary B cells from cord blood blood
33 chr10:97821000-97833200 Weak transcription Muscle Satellite Cultured Cells --
34 chr10:97821000-97849000 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr10:97821000-97849200 Weak transcription Primary B cells from peripheral blood blood
36 chr10:97821200-97834600 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr10:97821600-97849000 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr10:97822000-97833000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr10:97822200-97830200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr10:97822400-97830000 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr10:97822400-97830400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr10:97822400-97830400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr10:97822400-97832000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr10:97822400-97832200 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr10:97822400-97834600 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr10:97822400-97840200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
47 chr10:97822400-97848800 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr10:97822600-97831200 Weak transcription Left Ventricle heart
49 chr10:97822600-97832400 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr10:97822600-97832800 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015