Variant report

Variant rs12111326
Chromosome Location chr6:27112724-27112725
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:27101800-27112800 Weak transcription HSMMtube muscle
2 chr6:27107800-27113000 Weak transcription Brain Anterior Caudate brain
3 chr6:27107800-27113200 Weak transcription Lung lung
4 chr6:27108000-27112800 Weak transcription NHDF-Ad bronchial
5 chr6:27108000-27113200 Weak transcription Right Ventricle heart
6 chr6:27108400-27113000 Weak transcription HUVEC blood vessel
7 chr6:27108800-27114000 Transcr. at gene 5' and 3' K562 blood
8 chr6:27109800-27113000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr6:27111200-27112800 Enhancers Primary T killer memory cells from peripheral blood blood
10 chr6:27111200-27114200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr6:27111200-27116000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr6:27111400-27113200 Enhancers Stomach Mucosa stomach
13 chr6:27111400-27116000 Active TSS H9 Cell Line embryonic stem cell
14 chr6:27111400-27116800 Active TSS iPS-20b Cell Line embryonic stem cell
15 chr6:27111600-27113000 Weak transcription Small Intestine intestine
16 chr6:27111600-27113400 Flanking Active TSS Dnd41 blood
17 chr6:27111800-27114000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr6:27111800-27116000 Active TSS HUES48 Cell Line embryonic stem cell
19 chr6:27112000-27112800 Flanking Active TSS Thymus Thymus
20 chr6:27112000-27112800 Enhancers Spleen Spleen
21 chr6:27112000-27113000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
22 chr6:27112000-27113000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
23 chr6:27112000-27113000 Enhancers Duodenum Smooth Muscle Duodenum
24 chr6:27112000-27113000 Enhancers Left Ventricle heart
25 chr6:27112000-27113200 Enhancers Sigmoid Colon Sigmoid Colon
26 chr6:27112000-27115000 Active TSS GM12878-XiMat blood
27 chr6:27112000-27115800 Active TSS Duodenum Mucosa Duodenum
28 chr6:27112200-27113000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
29 chr6:27112200-27113000 Enhancers Placenta Placenta
30 chr6:27112200-27113000 Active TSS Hela-S3 cervix
31 chr6:27112200-27113200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
32 chr6:27112200-27114000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
33 chr6:27112200-27114200 Flanking Active TSS Primary B cells from cord blood blood
34 chr6:27112200-27115200 Active TSS Primary T regulatory cells fromperipheralblood blood
35 chr6:27112200-27115800 Active TSS Fetal Intestine Large intestine
36 chr6:27112200-27116000 Active TSS Breast Myoepithelial Primary Cells Breast
37 chr6:27112200-27116000 Active TSS A549 lung
38 chr6:27112200-27116200 Active TSS H1 Cell Line embryonic stem cell
39 chr6:27112400-27112800 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
40 chr6:27112400-27112800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
41 chr6:27112400-27113000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
42 chr6:27112400-27113000 Enhancers Colon Smooth Muscle Colon
43 chr6:27112400-27113400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr6:27112400-27113400 Flanking Active TSS Primary T cells from cord blood blood
45 chr6:27112400-27113400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
46 chr6:27112400-27113800 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr6:27112400-27113800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr6:27112400-27113800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
49 chr6:27112400-27114000 Flanking Active TSS Liver Liver
50 chr6:27112400-27114400 Flanking Active TSS Primary hematopoietic stem cells blood

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