The 2.0 version of rSNPBase

Variant report

Variant rs56065824
Chromosome Location chr6:27096766-27096767
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:27086400-27099200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:27090800-27098800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr6:27091800-27097000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr6:27095200-27099000 Weak transcription Stomach Mucosa stomach
5 chr6:27095200-27099200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr6:27095200-27099200 Weak transcription Pancreas Pancrea
7 chr6:27095200-27099200 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr6:27095400-27097200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr6:27095400-27097200 Weak transcription Thymus Thymus
10 chr6:27095400-27097400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr6:27095400-27097400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr6:27095400-27097800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr6:27095400-27098000 Enhancers iPS-18 Cell Line embryonic stem cell
14 chr6:27095400-27098000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr6:27095400-27098000 Weak transcription Fetal Intestine Small intestine
16 chr6:27095400-27098000 Weak transcription NHDF-Ad bronchial
17 chr6:27095400-27098000 Weak transcription NHEK skin
18 chr6:27095400-27098200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr6:27095400-27098200 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr6:27095400-27098200 Weak transcription Fetal Intestine Large intestine
21 chr6:27095400-27098400 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr6:27095400-27098400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr6:27095400-27098400 Weak transcription Duodenum Mucosa Duodenum
24 chr6:27095400-27098400 Weak transcription Fetal Heart heart
25 chr6:27095400-27098600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr6:27095400-27098600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr6:27095400-27098600 Weak transcription Fetal Kidney kidney
28 chr6:27095400-27098600 Weak transcription HSMM muscle
29 chr6:27095400-27098800 Weak transcription H9 Cell Line embryonic stem cell
30 chr6:27095400-27098800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr6:27095400-27098800 Weak transcription Primary B cells from peripheral blood blood
32 chr6:27095400-27098800 Weak transcription Primary T cells from cord blood blood
33 chr6:27095400-27098800 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr6:27095400-27098800 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr6:27095400-27098800 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr6:27095400-27098800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr6:27095400-27098800 Weak transcription Adipose Nuclei Adipose
38 chr6:27095400-27098800 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr6:27095400-27098800 Weak transcription Fetal Brain Female brain
40 chr6:27095400-27098800 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr6:27095400-27098800 Weak transcription Osteobl bone
42 chr6:27095400-27099000 Weak transcription Primary monocytes fromperipheralblood blood
43 chr6:27095400-27099000 Weak transcription Primary B cells from cord blood blood
44 chr6:27095400-27099000 Weak transcription Primary T killer memory cells from peripheral blood blood
45 chr6:27095400-27099000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr6:27095400-27099000 Weak transcription Colon Smooth Muscle Colon
47 chr6:27095400-27099000 Weak transcription Fetal Stomach stomach
48 chr6:27095400-27099000 Weak transcription Rectal Smooth Muscle rectum
49 chr6:27095400-27099200 Weak transcription Primary T cells fromperipheralblood blood
50 chr6:27095400-27099200 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015