The 2.0 version of rSNPBase

Variant report

Variant rs11753580
Chromosome Location chr6:27098027-27098028
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:27086400-27099200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:27090800-27098800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr6:27095200-27099000 Weak transcription Stomach Mucosa stomach
4 chr6:27095200-27099200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr6:27095200-27099200 Weak transcription Pancreas Pancrea
6 chr6:27095200-27099200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr6:27095400-27098200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr6:27095400-27098200 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr6:27095400-27098200 Weak transcription Fetal Intestine Large intestine
10 chr6:27095400-27098400 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr6:27095400-27098400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr6:27095400-27098400 Weak transcription Duodenum Mucosa Duodenum
13 chr6:27095400-27098400 Weak transcription Fetal Heart heart
14 chr6:27095400-27098600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr6:27095400-27098600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr6:27095400-27098600 Weak transcription Fetal Kidney kidney
17 chr6:27095400-27098600 Weak transcription HSMM muscle
18 chr6:27095400-27098800 Weak transcription H9 Cell Line embryonic stem cell
19 chr6:27095400-27098800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr6:27095400-27098800 Weak transcription Primary B cells from peripheral blood blood
21 chr6:27095400-27098800 Weak transcription Primary T cells from cord blood blood
22 chr6:27095400-27098800 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr6:27095400-27098800 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr6:27095400-27098800 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr6:27095400-27098800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr6:27095400-27098800 Weak transcription Adipose Nuclei Adipose
27 chr6:27095400-27098800 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr6:27095400-27098800 Weak transcription Fetal Brain Female brain
29 chr6:27095400-27098800 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr6:27095400-27098800 Weak transcription Osteobl bone
31 chr6:27095400-27099000 Weak transcription Primary monocytes fromperipheralblood blood
32 chr6:27095400-27099000 Weak transcription Primary B cells from cord blood blood
33 chr6:27095400-27099000 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr6:27095400-27099000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr6:27095400-27099000 Weak transcription Colon Smooth Muscle Colon
36 chr6:27095400-27099000 Weak transcription Fetal Stomach stomach
37 chr6:27095400-27099000 Weak transcription Rectal Smooth Muscle rectum
38 chr6:27095400-27099200 Weak transcription Primary T cells fromperipheralblood blood
39 chr6:27095400-27099200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr6:27095400-27099200 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr6:27095400-27099200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr6:27095400-27099200 Weak transcription Liver Liver
43 chr6:27095400-27099200 Weak transcription Left Ventricle heart
44 chr6:27095600-27098200 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr6:27095600-27098400 Enhancers HUES48 Cell Line embryonic stem cell
46 chr6:27095600-27098400 Weak transcription Muscle Satellite Cultured Cells --
47 chr6:27095600-27098600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr6:27095600-27098600 Weak transcription HUVEC blood vessel
49 chr6:27095600-27098600 Weak transcription NH-A brain
50 chr6:27095600-27098800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015