Variant report
| Variant | rs56141916 |
|---|---|
| Chromosome Location | chr6:27259544-27259545 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:27257800-27259600 | Bivalent/Poised TSS | HUES48 Cell Line | embryonic stem cell |
| 2 | chr6:27257800-27260000 | Active TSS | H9 Cell Line | embryonic stem cell |
| 3 | chr6:27258000-27259600 | Bivalent/Poised TSS | iPS-20b Cell Line | embryonic stem cell |
| 4 | chr6:27258000-27260000 | Bivalent/Poised TSS | iPS-15b Cell Line | embryonic stem cell |
| 5 | chr6:27258000-27261800 | ZNF genes & repeats | Pancreatic Islets | Pancreatic Islet |
| 6 | chr6:27258400-27261200 | Weak transcription | HMEC | breast |
| 7 | chr6:27258800-27261000 | Weak transcription | A549 | lung |
| 8 | chr6:27259200-27260000 | Enhancers | K562 | blood |
| 9 | chr6:27259200-27261200 | Weak transcription | NHEK | skin |
| 10 | chr6:27259400-27259600 | Bivalent/Poised TSS | HUES6 Cell Line | embryonic stem cell |
| 11 | chr6:27259400-27259600 | Bivalent Enhancer | iPS-18 Cell Line | embryonic stem cell |
| 12 | chr6:27259400-27261000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 13 | chr6:27259400-27261200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 14 | chr6:27259400-27263400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 15 | chr6:27259400-27263600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
