The 2.0 version of rSNPBase

Variant report

Variant rs12137644
Chromosome Location chr1:95419079-95419080
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95402400-95419400 Weak transcription H9 Cell Line embryonic stem cell
2 chr1:95404200-95421400 Weak transcription Aorta Aorta
3 chr1:95406000-95419400 Weak transcription Fetal Kidney kidney
4 chr1:95408400-95420000 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr1:95410600-95421600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:95411800-95419800 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr1:95413000-95420200 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr1:95413200-95419400 Weak transcription Left Ventricle heart
9 chr1:95413200-95419400 Weak transcription Rectal Smooth Muscle rectum
10 chr1:95413200-95427600 Weak transcription Colonic Mucosa Colon
11 chr1:95413400-95419400 Weak transcription Colon Smooth Muscle Colon
12 chr1:95413400-95419400 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr1:95413400-95421000 Weak transcription Pancreas Pancrea
14 chr1:95413600-95420000 Weak transcription Right Atrium heart
15 chr1:95415400-95422400 Enhancers Fetal Adrenal Gland Adrenal Gland
16 chr1:95415800-95420000 Weak transcription Right Ventricle heart
17 chr1:95415800-95421200 Weak transcription Esophagus oesophagus
18 chr1:95415800-95421200 Weak transcription HSMMtube muscle
19 chr1:95415800-95428400 Weak transcription Lung lung
20 chr1:95416000-95419400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr1:95416000-95419400 Weak transcription Fetal Lung lung
22 chr1:95416000-95419600 Weak transcription NHLF lung
23 chr1:95416000-95420000 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr1:95416000-95421200 Weak transcription Small Intestine intestine
25 chr1:95416000-95421400 Weak transcription Stomach Mucosa stomach
26 chr1:95416000-95427400 Weak transcription A549 lung
27 chr1:95416200-95421000 Weak transcription Fetal Intestine Large intestine
28 chr1:95416200-95421200 Weak transcription Fetal Thymus thymus
29 chr1:95416600-95420000 Weak transcription Osteobl bone
30 chr1:95416800-95420200 Weak transcription NH-A brain
31 chr1:95416800-95420800 Enhancers Placenta Placenta
32 chr1:95417200-95420800 Weak transcription Fetal Muscle Trunk muscle
33 chr1:95417400-95420000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr1:95417600-95419400 Weak transcription Duodenum Mucosa Duodenum
35 chr1:95417600-95420000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr1:95417600-95420000 Weak transcription Adipose Nuclei Adipose
37 chr1:95417600-95421200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:95417600-95421200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:95417600-95421200 Weak transcription NHDF-Ad bronchial
40 chr1:95417600-95421400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:95417800-95419200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr1:95417800-95420000 Weak transcription Spleen Spleen
43 chr1:95417800-95421400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr1:95417800-95424600 Enhancers HepG2 liver
45 chr1:95418000-95419800 Enhancers Sigmoid Colon Sigmoid Colon
46 chr1:95418200-95419400 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr1:95418400-95419200 Weak transcription Placenta Amnion Placenta Amnion
48 chr1:95418400-95419400 Weak transcription Dnd41 blood
49 chr1:95418400-95419400 Weak transcription HUVEC blood vessel
50 chr1:95418600-95419200 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015