The 2.0 version of rSNPBase

Variant report

Variant rs1246351
Chromosome Location chr1:95416741-95416742
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95399400-95418800 Weak transcription Ovary ovary
2 chr1:95402400-95419400 Weak transcription H9 Cell Line embryonic stem cell
3 chr1:95404200-95421400 Weak transcription Aorta Aorta
4 chr1:95406000-95419400 Weak transcription Fetal Kidney kidney
5 chr1:95408400-95420000 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr1:95410600-95421600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:95411800-95419800 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr1:95413000-95420200 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr1:95413200-95416800 Weak transcription Placenta Placenta
10 chr1:95413200-95419400 Weak transcription Left Ventricle heart
11 chr1:95413200-95419400 Weak transcription Rectal Smooth Muscle rectum
12 chr1:95413200-95427600 Weak transcription Colonic Mucosa Colon
13 chr1:95413400-95419400 Weak transcription Colon Smooth Muscle Colon
14 chr1:95413400-95419400 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr1:95413400-95421000 Weak transcription Pancreas Pancrea
16 chr1:95413600-95417200 Weak transcription Adipose Nuclei Adipose
17 chr1:95413600-95420000 Weak transcription Right Atrium heart
18 chr1:95414400-95418400 Enhancers Hela-S3 cervix
19 chr1:95415200-95417200 Enhancers Muscle Satellite Cultured Cells --
20 chr1:95415200-95417600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:95415200-95417600 Enhancers NHDF-Ad bronchial
22 chr1:95415200-95418600 Enhancers Liver Liver
23 chr1:95415400-95417600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr1:95415400-95417800 Enhancers NHEK skin
25 chr1:95415400-95422400 Enhancers Fetal Adrenal Gland Adrenal Gland
26 chr1:95415600-95416800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:95415600-95416800 Enhancers Fetal Heart heart
28 chr1:95415600-95417600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:95415600-95417600 Enhancers Duodenum Mucosa Duodenum
30 chr1:95415600-95418200 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr1:95415800-95417000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr1:95415800-95420000 Weak transcription Right Ventricle heart
33 chr1:95415800-95421200 Weak transcription Esophagus oesophagus
34 chr1:95415800-95421200 Weak transcription HSMMtube muscle
35 chr1:95415800-95428400 Weak transcription Lung lung
36 chr1:95416000-95417000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:95416000-95418000 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr1:95416000-95419400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:95416000-95419400 Weak transcription Fetal Lung lung
40 chr1:95416000-95419600 Weak transcription NHLF lung
41 chr1:95416000-95420000 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr1:95416000-95421200 Weak transcription Small Intestine intestine
43 chr1:95416000-95421400 Weak transcription Stomach Mucosa stomach
44 chr1:95416000-95427400 Weak transcription A549 lung
45 chr1:95416200-95421000 Weak transcription Fetal Intestine Large intestine
46 chr1:95416200-95421200 Weak transcription Fetal Thymus thymus
47 chr1:95416400-95417800 Weak transcription HepG2 liver
48 chr1:95416600-95416800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr1:95416600-95416800 Enhancers NH-A brain
50 chr1:95416600-95417800 Enhancers HMEC breast

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Last update: Aug 31, 2015