Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	E2F6	chr1:179499386-179499935	H1-hESC	embryonic stem cell:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:179497716..179500017-chr1:179555604..179558025,2	MCF-7	breast:

Variant related genes	Relation type
AXDND1	TF binding region
ENSG00000227141	Chromatin interaction

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10494520	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10913758	0.83[AMR][1000 genomes]
rs12073906	0.83[AMR][1000 genomes]
rs12118625	0.88[AMR][1000 genomes]
rs12132906	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12134114	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12135209	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12140299	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12406695	0.82[ASN][1000 genomes]
rs12408477	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12736300	0.87[ASN][1000 genomes]
rs12740270	0.87[ASN][1000 genomes]
rs12740455	0.88[ASN][1000 genomes]
rs12759446	0.88[ASN][1000 genomes]
rs16854229	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2274623	0.87[ASN][1000 genomes]
rs2274625	0.87[ASN][1000 genomes]
rs28508518	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34816244	0.86[ASN][1000 genomes]
rs35954891	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs36068644	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61826054	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61826055	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61827681	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs71514854	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9660720	0.83[AMR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:179486400-179499600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr1:179486600-179499600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:179487200-179515000	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr1:179497000-179499600	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr1:179498400-179499600	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr1:179498600-179499600	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr1:179498600-179500000	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr1:179498600-179509600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr1:179499000-179500200	Enhancers	H1 Cell Line	embryonic stem cell
10	chr1:179499200-179499600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
11	chr1:179499200-179499600	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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