The 2.0 version of rSNPBase

Variant report

Variant rs12171294
Chromosome Location chr3:145838573-145838574
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:145782800-145843200 Weak transcription Pancreas Pancrea
2 chr3:145784600-145848800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
3 chr3:145790400-145843200 Weak transcription Right Ventricle heart
4 chr3:145798800-145839200 Weak transcription Brain Inferior Temporal Lobe brain
5 chr3:145810400-145849800 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr3:145810800-145851200 Weak transcription Brain Hippocampus Middle brain
7 chr3:145812200-145839200 Weak transcription Rectal Smooth Muscle rectum
8 chr3:145814200-145841000 Weak transcription Lung lung
9 chr3:145816400-145842000 Weak transcription Colonic Mucosa Colon
10 chr3:145819800-145841800 Weak transcription Fetal Heart heart
11 chr3:145819800-145849200 Weak transcription Placenta Amnion Placenta Amnion
12 chr3:145821000-145849800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr3:145824600-145839600 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr3:145827000-145855200 Weak transcription Aorta Aorta
15 chr3:145827400-145840200 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr3:145827400-145842000 Weak transcription Duodenum Mucosa Duodenum
17 chr3:145831400-145848400 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr3:145832000-145870800 Weak transcription H9 Cell Line embryonic stem cell
19 chr3:145832600-145848400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr3:145833600-145843200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr3:145834200-145851200 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr3:145834400-145839000 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr3:145834400-145839600 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr3:145834400-145851400 Weak transcription Primary hematopoietic stem cells blood
25 chr3:145834600-145838800 Weak transcription Fetal Muscle Leg muscle
26 chr3:145834600-145841200 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr3:145834600-145852800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr3:145835200-145851200 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr3:145835200-145852200 Weak transcription H1 Cell Line embryonic stem cell
30 chr3:145835600-145843600 Weak transcription NHEK skin
31 chr3:145835600-145851200 Weak transcription Fetal Kidney kidney
32 chr3:145835800-145838600 Weak transcription NH-A brain
33 chr3:145835800-145843200 Weak transcription Small Intestine intestine
34 chr3:145835800-145846000 Weak transcription Fetal Intestine Small intestine
35 chr3:145835800-145874000 Weak transcription Psoas Muscle Psoas
36 chr3:145836000-145838800 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr3:145836000-145852400 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr3:145836200-145839000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr3:145836200-145840200 Weak transcription HMEC breast
40 chr3:145836200-145844200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr3:145836800-145839800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr3:145836800-145844000 Weak transcription NHLF lung
43 chr3:145837000-145838800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr3:145837000-145841800 Weak transcription Placenta Placenta
45 chr3:145837000-145843200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr3:145837000-145843200 Weak transcription Esophagus oesophagus
47 chr3:145837000-145844200 Weak transcription NHDF-Ad bronchial
48 chr3:145837000-145848800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr3:145837000-145852400 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr3:145837200-145838600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015