The 2.0 version of rSNPBase

Variant report

Variant rs9289717
Chromosome Location chr3:145826259-145826260
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:145781800-145831800 Weak transcription Psoas Muscle Psoas
2 chr3:145782800-145843200 Weak transcription Pancreas Pancrea
3 chr3:145784600-145848800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr3:145789200-145830800 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr3:145790400-145843200 Weak transcription Right Ventricle heart
6 chr3:145791600-145833800 Weak transcription NHDF-Ad bronchial
7 chr3:145794400-145827000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr3:145794400-145828000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr3:145798800-145839200 Weak transcription Brain Inferior Temporal Lobe brain
10 chr3:145808600-145833000 Weak transcription Fetal Lung lung
11 chr3:145810400-145829000 Weak transcription NHLF lung
12 chr3:145810400-145830800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr3:145810400-145849800 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr3:145810600-145827200 Weak transcription Small Intestine intestine
15 chr3:145810800-145851200 Weak transcription Brain Hippocampus Middle brain
16 chr3:145812000-145826800 Weak transcription Aorta Aorta
17 chr3:145812200-145839200 Weak transcription Rectal Smooth Muscle rectum
18 chr3:145814200-145841000 Weak transcription Lung lung
19 chr3:145814600-145828200 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr3:145815800-145830000 Strong transcription Osteobl bone
21 chr3:145816000-145836800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr3:145816400-145842000 Weak transcription Colonic Mucosa Colon
23 chr3:145818000-145827400 Strong transcription Fetal Intestine Large intestine
24 chr3:145818000-145829800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr3:145818600-145827200 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr3:145818800-145831600 Weak transcription Primary hematopoietic stem cells blood
27 chr3:145819000-145829200 Weak transcription Fetal Muscle Leg muscle
28 chr3:145819200-145828400 Strong transcription NH-A brain
29 chr3:145819800-145826800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr3:145819800-145831200 Weak transcription Fetal Stomach stomach
31 chr3:145819800-145841800 Weak transcription Fetal Heart heart
32 chr3:145819800-145849200 Weak transcription Placenta Amnion Placenta Amnion
33 chr3:145820000-145834000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr3:145820600-145830000 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr3:145821000-145830800 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr3:145821000-145831600 Weak transcription Placenta Placenta
37 chr3:145821000-145849800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr3:145821200-145826800 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr3:145821200-145835200 Weak transcription Colon Smooth Muscle Colon
40 chr3:145821200-145835400 Weak transcription Stomach Smooth Muscle stomach
41 chr3:145821600-145826600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr3:145822000-145826600 Weak transcription Duodenum Mucosa Duodenum
43 chr3:145822000-145829600 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr3:145822200-145826400 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr3:145822200-145833800 Weak transcription Fetal Kidney kidney
46 chr3:145822600-145826600 Weak transcription Adipose Nuclei Adipose
47 chr3:145822800-145836800 Weak transcription Ovary ovary
48 chr3:145823000-145831800 Weak transcription H9 Cell Line embryonic stem cell
49 chr3:145823200-145832000 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr3:145823800-145830800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015