Variant report

Variant rs6783601
Chromosome Location chr3:145834830-145834831
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:145782800-145843200 Weak transcription Pancreas Pancrea
2 chr3:145784600-145848800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
3 chr3:145790400-145843200 Weak transcription Right Ventricle heart
4 chr3:145798800-145839200 Weak transcription Brain Inferior Temporal Lobe brain
5 chr3:145810400-145849800 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr3:145810800-145851200 Weak transcription Brain Hippocampus Middle brain
7 chr3:145812200-145839200 Weak transcription Rectal Smooth Muscle rectum
8 chr3:145814200-145841000 Weak transcription Lung lung
9 chr3:145816000-145836800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr3:145816400-145842000 Weak transcription Colonic Mucosa Colon
11 chr3:145819800-145841800 Weak transcription Fetal Heart heart
12 chr3:145819800-145849200 Weak transcription Placenta Amnion Placenta Amnion
13 chr3:145821000-145849800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr3:145821200-145835200 Weak transcription Colon Smooth Muscle Colon
15 chr3:145821200-145835400 Weak transcription Stomach Smooth Muscle stomach
16 chr3:145822800-145836800 Weak transcription Ovary ovary
17 chr3:145824600-145835000 Weak transcription HMEC breast
18 chr3:145824600-145839600 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr3:145825000-145835400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr3:145827000-145855200 Weak transcription Aorta Aorta
21 chr3:145827400-145836600 Weak transcription Adipose Nuclei Adipose
22 chr3:145827400-145836600 Weak transcription HSMMtube muscle
23 chr3:145827400-145840200 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr3:145827400-145842000 Weak transcription Duodenum Mucosa Duodenum
25 chr3:145828600-145837200 Strong transcription HSMM muscle
26 chr3:145831400-145848400 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr3:145832000-145835000 Strong transcription Muscle Satellite Cultured Cells --
28 chr3:145832000-145836800 Weak transcription Placenta Placenta
29 chr3:145832000-145870800 Weak transcription H9 Cell Line embryonic stem cell
30 chr3:145832200-145835600 Weak transcription Psoas Muscle Psoas
31 chr3:145832200-145836800 Weak transcription Left Ventricle heart
32 chr3:145832200-145838400 Weak transcription Fetal Stomach stomach
33 chr3:145832400-145835000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr3:145832400-145835400 Strong transcription Osteobl bone
35 chr3:145832600-145848400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr3:145833000-145835200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
37 chr3:145833000-145835600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr3:145833000-145835600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
39 chr3:145833000-145837400 Strong transcription HUVEC blood vessel
40 chr3:145833200-145835000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
41 chr3:145833200-145837200 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr3:145833600-145843200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr3:145833800-145835400 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr3:145834200-145835200 Strong transcription HUES64 Cell Line embryonic stem cell
45 chr3:145834200-145835400 Weak transcription Fetal Intestine Large intestine
46 chr3:145834200-145836800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr3:145834200-145837200 Strong transcription A549 lung
48 chr3:145834200-145851200 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr3:145834400-145835400 Weak transcription NH-A brain
50 chr3:145834400-145839000 Weak transcription iPS-18 Cell Line embryonic stem cell

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