Variant report

Variant rs12193920
Chromosome Location chr6:162311683-162311684
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:162310000-162327200 Weak transcription Right Ventricle heart
2 chr6:162310200-162312200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
3 chr6:162310400-162312200 Active TSS Brain Inferior Temporal Lobe brain
4 chr6:162310400-162312200 Enhancers Fetal Muscle Leg muscle
5 chr6:162311000-162312000 Active TSS Brain Hippocampus Middle brain
6 chr6:162311200-162311800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
7 chr6:162311200-162311800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
8 chr6:162311200-162312400 Active TSS Brain Cingulate Gyrus brain
9 chr6:162311200-162312400 Enhancers Fetal Brain Male brain
10 chr6:162311200-162312800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
11 chr6:162311400-162311800 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
12 chr6:162311400-162311800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr6:162311400-162311800 Enhancers Stomach Smooth Muscle stomach
14 chr6:162311400-162312000 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
15 chr6:162311400-162312000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr6:162311400-162312000 Flanking Active TSS Brain Germinal Matrix brain
17 chr6:162311400-162312000 Enhancers Ovary ovary
18 chr6:162311400-162312200 Flanking Active TSS Fetal Lung lung
19 chr6:162311400-162312400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
20 chr6:162311400-162312400 Active TSS Brain Anterior Caudate brain
21 chr6:162311400-162312600 Flanking Bivalent TSS/Enh HUES48 Cell Line embryonic stem cell
22 chr6:162311400-162312800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr6:162311400-162313000 Bivalent Enhancer H1 Cell Line embryonic stem cell
24 chr6:162311400-162313000 Enhancers H9 Cell Line embryonic stem cell
25 chr6:162311600-162311800 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
26 chr6:162311600-162311800 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
27 chr6:162311600-162311800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr6:162311600-162311800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr6:162311600-162311800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr6:162311600-162311800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr6:162311600-162311800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
32 chr6:162311600-162311800 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
33 chr6:162311600-162311800 Flanking Active TSS Fetal Brain Female brain
34 chr6:162311600-162312000 Bivalent Enhancer ES-WA7 Cell Line embryonic stem cell
35 chr6:162311600-162312000 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
36 chr6:162311600-162312200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr6:162311600-162312200 Flanking Active TSS Brain Angular Gyrus brain
38 chr6:162311600-162312400 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
39 chr6:162311600-162312400 Active TSS Brain Substantia Nigra brain
40 chr6:162311600-162312400 Enhancers Fetal Stomach stomach
41 chr6:162311600-162312600 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
42 chr6:162311600-162312800 Enhancers Fetal Kidney kidney
43 chr6:162311600-162312800 Enhancers NH-A brain

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