Variant report

Variant rs12200671
Chromosome Location chr6:1992734-1992735
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:1985000-2010200 Weak transcription Fetal Intestine Large intestine
2 chr6:1987400-2003600 Weak transcription Aorta Aorta
3 chr6:1987800-1992800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr6:1988400-1992800 Weak transcription Osteobl bone
5 chr6:1988400-1993200 Weak transcription NH-A brain
6 chr6:1988400-1993400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr6:1988400-1993400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr6:1988400-2008600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr6:1988600-1993000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr6:1988600-1993000 Weak transcription NHEK skin
11 chr6:1988800-1992800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr6:1988800-1993000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr6:1988800-1993200 Weak transcription HMEC breast
14 chr6:1988800-1995400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr6:1990200-2008600 Weak transcription Pancreas Pancrea
16 chr6:1990400-2010800 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr6:1991200-1994000 Weak transcription Spleen Spleen
18 chr6:1991400-1993200 Strong transcription HepG2 liver
19 chr6:1991800-1993400 Strong transcription Primary T cells from cord blood blood
20 chr6:1992000-1993200 Strong transcription Duodenum Mucosa Duodenum
21 chr6:1992200-1992800 Enhancers Gastric stomach
22 chr6:1992200-1992800 Weak transcription Lung lung
23 chr6:1992200-1993400 Weak transcription Fetal Stomach stomach
24 chr6:1992600-1992800 Strong transcription Fetal Intestine Small intestine
25 chr6:1992600-1993000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr6:1992600-1993600 Enhancers Fetal Muscle Leg muscle

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