Variant report

Variant rs1220430
Chromosome Location chr2:234430033-234430034
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234387400-234466000 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr2:234390800-234441000 Weak transcription Fetal Brain Male brain
3 chr2:234395600-234431800 Weak transcription Colonic Mucosa Colon
4 chr2:234398000-234452800 Weak transcription HUVEC blood vessel
5 chr2:234398400-234442400 Weak transcription Hela-S3 cervix
6 chr2:234398600-234431800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr2:234401200-234430800 Weak transcription NHLF lung
8 chr2:234402200-234472400 Weak transcription Psoas Muscle Psoas
9 chr2:234402600-234430600 Weak transcription Rectal Smooth Muscle rectum
10 chr2:234402600-234436800 Weak transcription Gastric stomach
11 chr2:234402600-234454000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr2:234404400-234455000 Weak transcription Fetal Thymus thymus
13 chr2:234405000-234431200 Weak transcription Placenta Amnion Placenta Amnion
14 chr2:234407800-234431800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr2:234407800-234436800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr2:234411400-234432400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr2:234411600-234431800 Weak transcription Lung lung
18 chr2:234411600-234465600 Weak transcription Thymus Thymus
19 chr2:234412400-234437600 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr2:234412600-234437400 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr2:234413000-234431000 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr2:234413000-234474200 Weak transcription Fetal Heart heart
23 chr2:234413200-234431400 Weak transcription Brain Cingulate Gyrus brain
24 chr2:234413200-234440600 Weak transcription Dnd41 blood
25 chr2:234413400-234431200 Weak transcription NHEK skin
26 chr2:234414000-234461800 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr2:234415400-234440600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr2:234416200-234441200 Weak transcription Fetal Kidney kidney
29 chr2:234416200-234441800 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr2:234418600-234436400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr2:234420000-234431200 Weak transcription Ovary ovary
32 chr2:234420200-234430600 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr2:234423200-234473400 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr2:234423600-234439600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr2:234423800-234432600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr2:234423800-234441400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr2:234424400-234431800 Weak transcription HSMMtube muscle
38 chr2:234424600-234433600 Weak transcription K562 blood
39 chr2:234425600-234431200 Weak transcription Fetal Stomach stomach
40 chr2:234425600-234432400 Weak transcription Fetal Intestine Small intestine
41 chr2:234426200-234474000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr2:234426400-234453600 Weak transcription NH-A brain
43 chr2:234427000-234466200 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr2:234427200-234431600 Enhancers Primary B cells from peripheral blood blood
45 chr2:234427200-234438200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr2:234427200-234438200 Strong transcription Liver Liver
47 chr2:234427200-234438200 Strong transcription Placenta Placenta
48 chr2:234427200-234438400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr2:234427200-234438400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr2:234427400-234431800 Weak transcription Spleen Spleen

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