Variant report

Variant rs838543
Chromosome Location chr2:234432017-234432018
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234387400-234466000 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr2:234390800-234441000 Weak transcription Fetal Brain Male brain
3 chr2:234398000-234452800 Weak transcription HUVEC blood vessel
4 chr2:234398400-234442400 Weak transcription Hela-S3 cervix
5 chr2:234402200-234472400 Weak transcription Psoas Muscle Psoas
6 chr2:234402600-234436800 Weak transcription Gastric stomach
7 chr2:234402600-234454000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr2:234404400-234455000 Weak transcription Fetal Thymus thymus
9 chr2:234407800-234436800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr2:234411400-234432400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr2:234411600-234465600 Weak transcription Thymus Thymus
12 chr2:234412400-234437600 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr2:234412600-234437400 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr2:234413000-234474200 Weak transcription Fetal Heart heart
15 chr2:234413200-234440600 Weak transcription Dnd41 blood
16 chr2:234414000-234461800 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr2:234415400-234440600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr2:234416200-234441200 Weak transcription Fetal Kidney kidney
19 chr2:234416200-234441800 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr2:234418600-234436400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr2:234423200-234473400 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr2:234423600-234439600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr2:234423800-234432600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr2:234423800-234441400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr2:234424600-234433600 Weak transcription K562 blood
26 chr2:234425600-234432400 Weak transcription Fetal Intestine Small intestine
27 chr2:234426200-234474000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr2:234426400-234453600 Weak transcription NH-A brain
29 chr2:234427000-234466200 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr2:234427200-234438200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr2:234427200-234438200 Strong transcription Liver Liver
32 chr2:234427200-234438200 Strong transcription Placenta Placenta
33 chr2:234427200-234438400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr2:234427200-234438400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr2:234427400-234432800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr2:234427400-234432800 Strong transcription Rectal Mucosa Donor 31 rectum
37 chr2:234427400-234433200 Strong transcription Stomach Smooth Muscle stomach
38 chr2:234427400-234434800 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr2:234427400-234435200 Strong transcription Adipose Nuclei Adipose
40 chr2:234427400-234438200 Strong transcription Skeletal Muscle Female skeletal muscle
41 chr2:234427400-234440600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr2:234427400-234463800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr2:234427600-234432200 Strong transcription Monocytes-CD14+_RO01746 blood
44 chr2:234427600-234433000 Strong transcription Duodenum Smooth Muscle Duodenum
45 chr2:234427600-234440400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr2:234428600-234433800 Strong transcription Fetal Muscle Trunk muscle
47 chr2:234428600-234440800 Weak transcription Primary monocytes fromperipheralblood blood
48 chr2:234428600-234440800 Weak transcription Muscle Satellite Cultured Cells --
49 chr2:234428800-234432800 Strong transcription HSMM muscle
50 chr2:234428800-234474400 Weak transcription Brain Germinal Matrix brain

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