Variant report

Variant rs838558
Chromosome Location chr2:234408899-234408900
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234364000-234411200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:234373000-234409800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr2:234375400-234411200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr2:234384000-234412400 Weak transcription Fetal Heart heart
5 chr2:234387400-234466000 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr2:234390800-234441000 Weak transcription Fetal Brain Male brain
7 chr2:234391600-234412000 Strong transcription Skeletal Muscle Female skeletal muscle
8 chr2:234392000-234411600 Weak transcription Fetal Brain Female brain
9 chr2:234395600-234431800 Weak transcription Colonic Mucosa Colon
10 chr2:234395800-234411400 Strong transcription Liver Liver
11 chr2:234396800-234409600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr2:234397800-234411400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr2:234398000-234452800 Weak transcription HUVEC blood vessel
14 chr2:234398200-234411200 Weak transcription Esophagus oesophagus
15 chr2:234398200-234411200 Weak transcription Thymus Thymus
16 chr2:234398400-234442400 Weak transcription Hela-S3 cervix
17 chr2:234398600-234431800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr2:234399000-234409000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr2:234399000-234409200 Strong transcription Primary T helper cells fromperipheralblood blood
20 chr2:234399600-234410000 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr2:234400200-234410600 Weak transcription Small Intestine intestine
22 chr2:234400400-234430000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr2:234401200-234410400 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr2:234401200-234411200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr2:234401200-234430800 Weak transcription NHLF lung
26 chr2:234401800-234410400 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr2:234402200-234409800 Weak transcription Brain Substantia Nigra brain
28 chr2:234402200-234409800 Weak transcription NHDF-Ad bronchial
29 chr2:234402200-234410600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr2:234402200-234411200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr2:234402200-234411200 Weak transcription Pancreas Pancrea
32 chr2:234402200-234411200 Weak transcription Spleen Spleen
33 chr2:234402200-234411200 Weak transcription Dnd41 blood
34 chr2:234402200-234472400 Weak transcription Psoas Muscle Psoas
35 chr2:234402600-234410000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr2:234402600-234410400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr2:234402600-234429800 Weak transcription Right Ventricle heart
38 chr2:234402600-234430600 Weak transcription Rectal Smooth Muscle rectum
39 chr2:234402600-234436800 Weak transcription Gastric stomach
40 chr2:234402600-234454000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr2:234402800-234410000 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr2:234403600-234409000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr2:234403600-234411200 Strong transcription Adipose Nuclei Adipose
44 chr2:234404200-234409000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr2:234404200-234411200 Strong transcription Breast Myoepithelial Primary Cells Breast
46 chr2:234404400-234455000 Weak transcription Fetal Thymus thymus
47 chr2:234404600-234409800 Weak transcription Brain Hippocampus Middle brain
48 chr2:234405000-234409000 Weak transcription Stomach Mucosa stomach
49 chr2:234405000-234410400 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr2:234405000-234431200 Weak transcription Placenta Amnion Placenta Amnion

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