The 2.0 version of rSNPBase

Variant report

Variant rs12209262
Chromosome Location chr6:133073173-133073174
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:133061400-133098000 Weak transcription Spleen Spleen
2 chr6:133064200-133083000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr6:133064800-133078000 Strong transcription Primary T cells from cord blood blood
4 chr6:133065000-133098000 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr6:133065400-133073800 Strong transcription Primary T helper naive cells fromperipheralblood blood
6 chr6:133068800-133083200 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr6:133069600-133083200 Weak transcription Thymus Thymus
8 chr6:133069800-133075200 Weak transcription Primary hematopoietic stem cells blood
9 chr6:133070200-133073800 Genic enhancers Primary B cells from peripheral blood blood
10 chr6:133070800-133077600 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr6:133070800-133078800 Weak transcription Placenta Placenta
12 chr6:133070800-133079000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
13 chr6:133072000-133073400 Flanking Active TSS GM12878-XiMat blood
14 chr6:133072000-133073600 Enhancers Primary T killer memory cells from peripheral blood blood
15 chr6:133072000-133076000 Genic enhancers Primary monocytes fromperipheralblood blood
16 chr6:133072200-133073200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr6:133072200-133073200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr6:133072200-133074000 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
19 chr6:133072200-133077200 Transcr. at gene 5' and 3' Primary neutrophils fromperipheralblood blood
20 chr6:133072200-133079000 Strong transcription Primary T cells fromperipheralblood blood
21 chr6:133072400-133073200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
22 chr6:133072400-133073200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
23 chr6:133072400-133076800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
24 chr6:133072600-133075400 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr6:133072800-133076800 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr6:133072800-133082000 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr6:133072800-133084400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr6:133072800-133084800 Weak transcription Stomach Mucosa stomach
29 chr6:133073000-133073400 Enhancers Primary hematopoietic stem cells short term culture blood
30 chr6:133073000-133074000 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
31 chr6:133073000-133074000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr6:133073000-133074000 Enhancers HMEC breast
33 chr6:133073000-133080000 Strong transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015