Variant report

Variant	rs12234132
Chromosome Location	chr6:12042205-12042206
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:12038244..12040741-chr6:12042062..12045321,3	K562	blood:
2	chr6:12038480..12040741-chr6:12042062..12044805,2	K562	blood:

rs_ID	r²[population]
rs10498679	0.82[JPT][hapmap]
rs12176308	0.82[JPT][hapmap]
rs16872277	0.82[JPT][hapmap]
rs6910959	0.82[JPT][hapmap]
rs6940075	0.82[JPT][hapmap]
rs9349068	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.83[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs9349095	0.82[JPT][hapmap]
rs9366954	0.88[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs9366970	0.82[JPT][hapmap]
rs9366972	0.82[JPT][hapmap]
rs9369070	0.82[JPT][hapmap]
rs9369072	0.82[JPT][hapmap]
rs9380764	0.82[JPT][hapmap]
rs9394517	0.82[JPT][hapmap]

Chromatin state (count:82 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:12018600-12049400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr6:12018600-12052000	Weak transcription	Thymus	Thymus
3	chr6:12023200-12047800	Weak transcription	Fetal Muscle Trunk	muscle
4	chr6:12026000-12044800	Weak transcription	NHDF-Ad	bronchial
5	chr6:12029200-12045000	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr6:12029800-12042800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr6:12032000-12044800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr6:12032000-12044800	Weak transcription	NH-A	brain
9	chr6:12032000-12047600	Weak transcription	Fetal Stomach	stomach
10	chr6:12034400-12045000	Weak transcription	HUVEC	blood vessel
11	chr6:12034600-12044800	Weak transcription	Hela-S3	cervix
12	chr6:12034600-12045000	Weak transcription	A549	lung
13	chr6:12034800-12047600	Weak transcription	Fetal Intestine Large	intestine
14	chr6:12034800-12061000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr6:12035000-12049800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
16	chr6:12035200-12044600	Weak transcription	Sigmoid Colon	Sigmoid Colon
17	chr6:12035200-12044800	Weak transcription	Brain Hippocampus Middle	brain
18	chr6:12035200-12044800	Weak transcription	Duodenum Mucosa	Duodenum
19	chr6:12035200-12047800	Weak transcription	Skeletal Muscle Male	skeletal muscle
20	chr6:12035200-12052200	Weak transcription	Stomach Mucosa	stomach
21	chr6:12035400-12044000	Weak transcription	Liver	Liver
22	chr6:12035400-12044800	Weak transcription	Aorta	Aorta
23	chr6:12035400-12044800	Weak transcription	HSMMtube	muscle
24	chr6:12035400-12045000	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr6:12035600-12044800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr6:12038000-12047600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
27	chr6:12038200-12044800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
28	chr6:12038200-12044800	Weak transcription	Brain Angular Gyrus	brain
29	chr6:12038200-12045000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
30	chr6:12038200-12045000	Weak transcription	Ovary	ovary
31	chr6:12038200-12045000	Weak transcription	Small Intestine	intestine
32	chr6:12038400-12043800	Weak transcription	Primary T helper cells fromperipheralblood	blood
33	chr6:12038400-12044800	Weak transcription	Primary B cells from cord blood	blood
34	chr6:12038400-12044800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
35	chr6:12038400-12045000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr6:12038600-12044600	Weak transcription	NHEK	skin
37	chr6:12038600-12044800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
38	chr6:12039200-12044600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
39	chr6:12040000-12044800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
40	chr6:12040000-12045600	Weak transcription	Primary T cells from cord blood	blood
41	chr6:12040200-12044600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
42	chr6:12040200-12044600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
43	chr6:12040200-12044800	Weak transcription	Right Ventricle	heart
44	chr6:12040200-12044800	Weak transcription	Spleen	Spleen
45	chr6:12040200-12045000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
46	chr6:12040200-12045000	Weak transcription	Gastric	stomach
47	chr6:12040200-12047600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
48	chr6:12040200-12048000	Weak transcription	H9 Cell Line	embryonic stem cell
49	chr6:12040200-12048600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr6:12040200-12060800	Weak transcription	HUES48 Cell Line	embryonic stem cell

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