Variant report

Variant rs12246490
Chromosome Location chr10:554631-554632
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:532000-557000 Weak transcription Pancreas Pancrea
2 chr10:537600-556600 Weak transcription HSMM muscle
3 chr10:540000-556400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr10:544600-556800 Weak transcription Placenta Placenta
5 chr10:545200-554800 Weak transcription Ovary ovary
6 chr10:545400-565000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr10:546000-556800 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr10:546200-555000 Weak transcription Left Ventricle heart
9 chr10:546200-555200 Weak transcription Fetal Brain Male brain
10 chr10:546800-556400 Weak transcription NHLF lung
11 chr10:547000-560200 Weak transcription Aorta Aorta
12 chr10:547200-555800 Weak transcription Fetal Brain Female brain
13 chr10:547200-556200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr10:547200-556800 Weak transcription Psoas Muscle Psoas
15 chr10:547400-555400 Weak transcription Brain Cingulate Gyrus brain
16 chr10:547400-555400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr10:547400-556600 Weak transcription Duodenum Mucosa Duodenum
18 chr10:547600-555200 Weak transcription Brain Hippocampus Middle brain
19 chr10:547600-556400 Weak transcription NH-A brain
20 chr10:547800-555200 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr10:548000-556400 Weak transcription Lung lung
22 chr10:548200-555600 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr10:548600-556800 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr10:548800-556800 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr10:550200-556800 Weak transcription Fetal Kidney kidney
26 chr10:550400-556800 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr10:550600-555600 Weak transcription Esophagus oesophagus
28 chr10:551000-556800 Weak transcription Placenta Amnion Placenta Amnion
29 chr10:552000-555400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr10:552000-556600 Strong transcription Fetal Intestine Small intestine
31 chr10:552200-555400 Weak transcription Brain Anterior Caudate brain
32 chr10:552200-555800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr10:552200-557400 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr10:552400-555400 Strong transcription Fetal Stomach stomach
35 chr10:552400-556000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr10:552600-554800 Weak transcription Brain Inferior Temporal Lobe brain
37 chr10:552600-567800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr10:552800-555200 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr10:552800-555400 Strong transcription Fetal Intestine Large intestine
40 chr10:552800-555600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr10:553000-555200 Weak transcription Colon Smooth Muscle Colon
42 chr10:553000-555600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr10:553000-555600 Weak transcription Brain Germinal Matrix brain
44 chr10:553000-559400 Weak transcription Gastric stomach
45 chr10:553200-554800 Weak transcription Fetal Muscle Leg muscle
46 chr10:553200-555200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr10:553200-555800 Weak transcription Brain Substantia Nigra brain
48 chr10:553200-556400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr10:553200-567000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr10:553400-554800 Weak transcription Brain Angular Gyrus brain

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