Variant report

Variant rs816600
Chromosome Location chr10:547254-547255
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:532000-557000 Weak transcription Pancreas Pancrea
2 chr10:537200-549400 Weak transcription Esophagus oesophagus
3 chr10:537200-551400 Weak transcription Spleen Spleen
4 chr10:537600-547800 Enhancers Rectal Smooth Muscle rectum
5 chr10:537600-556600 Weak transcription HSMM muscle
6 chr10:538000-552600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr10:539800-552800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr10:540000-556400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr10:540800-548000 Weak transcription HSMMtube muscle
10 chr10:543000-548000 Enhancers Colon Smooth Muscle Colon
11 chr10:543400-547600 Enhancers Brain Hippocampus Middle brain
12 chr10:543600-552000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr10:543800-547400 Enhancers Brain Cingulate Gyrus brain
14 chr10:543800-548000 Enhancers Brain Anterior Caudate brain
15 chr10:544200-547600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
16 chr10:544200-547800 Enhancers Cortex derived primary cultured neurospheres brain
17 chr10:544400-547800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr10:544400-548200 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr10:544600-547600 Enhancers Fetal Heart heart
20 chr10:544600-556800 Weak transcription Placenta Placenta
21 chr10:544800-547800 Enhancers Skeletal Muscle Female skeletal muscle
22 chr10:544800-548200 Enhancers Primary hematopoietic stem cells blood
23 chr10:545000-548800 Enhancers Primary hematopoietic stem cells short term culture blood
24 chr10:545200-550600 Weak transcription Fetal Intestine Small intestine
25 chr10:545200-554800 Weak transcription Ovary ovary
26 chr10:545400-565000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr10:545600-547400 Enhancers Stomach Smooth Muscle stomach
28 chr10:545800-548600 Enhancers Primary T killer naive cells fromperipheralblood blood
29 chr10:546000-547800 Enhancers Adipose Nuclei Adipose
30 chr10:546000-547800 Enhancers Pancreatic Islets Pancreatic Islet
31 chr10:546000-548000 Enhancers Primary T cells fromperipheralblood blood
32 chr10:546000-548000 Enhancers Duodenum Smooth Muscle Duodenum
33 chr10:546000-548800 Enhancers Primary T helper naive cells fromperipheralblood blood
34 chr10:546000-556800 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr10:546200-547600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr10:546200-547600 Weak transcription Lung lung
37 chr10:546200-547800 Enhancers Skeletal Muscle Male skeletal muscle
38 chr10:546200-548600 Enhancers Primary T helper naive cells from peripheral blood blood
39 chr10:546200-548800 Enhancers Primary T helper 17 cells PMA-I stimulated --
40 chr10:546200-548800 Enhancers Primary T helper cells fromperipheralblood blood
41 chr10:546200-549000 Enhancers Primary T helper cells PMA-I stimulated --
42 chr10:546200-550200 Weak transcription Fetal Muscle Trunk muscle
43 chr10:546200-551800 Weak transcription Fetal Stomach stomach
44 chr10:546200-552800 Weak transcription Fetal Intestine Large intestine
45 chr10:546200-555000 Weak transcription Left Ventricle heart
46 chr10:546200-555200 Weak transcription Fetal Brain Male brain
47 chr10:546400-547600 Enhancers Primary T killer memory cells from peripheral blood blood
48 chr10:546400-547600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr10:546400-547600 Weak transcription Right Atrium heart
50 chr10:546400-547800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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