Variant report

Variant rs1539231
Chromosome Location chr10:530644-530645
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:513000-531400 Weak transcription Placenta Amnion Placenta Amnion
2 chr10:517000-536800 Weak transcription H9 Cell Line embryonic stem cell
3 chr10:517200-531000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr10:523000-532600 Weak transcription Spleen Spleen
5 chr10:524400-532400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr10:526200-532600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr10:526400-531400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr10:527800-530800 Weak transcription Gastric stomach
9 chr10:528000-531000 Weak transcription Fetal Brain Male brain
10 chr10:529000-530800 Strong transcription Fetal Intestine Large intestine
11 chr10:529200-531000 Weak transcription Fetal Heart heart
12 chr10:530000-531400 Active TSS NHDF-Ad bronchial
13 chr10:530000-531600 Active TSS Duodenum Mucosa Duodenum
14 chr10:530000-533400 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr10:530200-531000 Active TSS NHEK skin
16 chr10:530200-531200 Active TSS Primary T cells fromperipheralblood blood
17 chr10:530200-531200 Active TSS Muscle Satellite Cultured Cells --
18 chr10:530200-531400 Active TSS Primary T helper memory cells from peripheral blood 1 blood
19 chr10:530200-531600 Active TSS Primary B cells from cord blood blood
20 chr10:530200-531600 Active TSS Primary T helper naive cells from peripheral blood blood
21 chr10:530200-531600 Active TSS Pancreatic Islets Pancreatic Islet
22 chr10:530200-531800 Active TSS Primary T regulatory cells fromperipheralblood blood
23 chr10:530200-531800 Active TSS Duodenum Smooth Muscle Duodenum
24 chr10:530200-532000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
25 chr10:530400-530800 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr10:530400-530800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
27 chr10:530400-530800 Transcr. at gene 5' and 3' Brain Hippocampus Middle brain
28 chr10:530400-531000 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr10:530400-531000 Enhancers iPS-15b Cell Line embryonic stem cell
30 chr10:530400-531000 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr10:530400-531000 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr10:530400-531000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
33 chr10:530400-531000 Active TSS Brain Cingulate Gyrus brain
34 chr10:530400-531000 Transcr. at gene 5' and 3' Fetal Muscle Trunk muscle
35 chr10:530400-531000 Active TSS Fetal Thymus thymus
36 chr10:530400-531000 Active TSS A549 lung
37 chr10:530400-531000 Active TSS NH-A brain
38 chr10:530400-531200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
39 chr10:530400-531200 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
40 chr10:530400-531200 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
41 chr10:530400-531200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
42 chr10:530400-531200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr10:530400-531200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr10:530400-531200 Active TSS Primary B cells from peripheral blood blood
45 chr10:530400-531200 Active TSS Primary hematopoietic stem cells short term culture blood
46 chr10:530400-531200 Active TSS Liver Liver
47 chr10:530400-531200 Active TSS Brain Inferior Temporal Lobe brain
48 chr10:530400-531200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
49 chr10:530400-531200 Active TSS Esophagus oesophagus
50 chr10:530400-531200 Transcr. at gene 5' and 3' Fetal Brain Female brain

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