Variant report

Variant rs816602
Chromosome Location chr10:545195-545196
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:531400-545800 Weak transcription Gastric stomach
2 chr10:532000-557000 Weak transcription Pancreas Pancrea
3 chr10:537200-549400 Weak transcription Esophagus oesophagus
4 chr10:537200-551400 Weak transcription Spleen Spleen
5 chr10:537400-545800 Weak transcription Fetal Intestine Large intestine
6 chr10:537600-547800 Enhancers Rectal Smooth Muscle rectum
7 chr10:537600-556600 Weak transcription HSMM muscle
8 chr10:538000-546400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr10:538000-552600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr10:539200-546600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr10:539400-546200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr10:539800-552800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr10:540000-556400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr10:540200-545200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr10:540200-545600 Weak transcription Fetal Thymus thymus
16 chr10:540600-545400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr10:540800-548000 Weak transcription HSMMtube muscle
18 chr10:541000-546000 Weak transcription Psoas Muscle Psoas
19 chr10:541800-545400 Weak transcription Fetal Muscle Leg muscle
20 chr10:542000-546400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr10:543000-548000 Enhancers Colon Smooth Muscle Colon
22 chr10:543200-545200 Strong transcription Fetal Intestine Small intestine
23 chr10:543200-546200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
24 chr10:543200-546400 Enhancers Brain Inferior Temporal Lobe brain
25 chr10:543400-545200 Enhancers Ovary ovary
26 chr10:543400-546200 Enhancers Left Ventricle heart
27 chr10:543400-547200 Enhancers Brain Angular Gyrus brain
28 chr10:543400-547600 Enhancers Brain Hippocampus Middle brain
29 chr10:543600-546200 Enhancers Fetal Brain Male brain
30 chr10:543600-552000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr10:543800-546200 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr10:543800-546400 Enhancers Right Ventricle heart
33 chr10:543800-547400 Enhancers Brain Cingulate Gyrus brain
34 chr10:543800-548000 Enhancers Brain Anterior Caudate brain
35 chr10:544000-546400 Enhancers Right Atrium heart
36 chr10:544200-545400 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr10:544200-545600 Enhancers Lung lung
38 chr10:544200-547200 Enhancers Brain Substantia Nigra brain
39 chr10:544200-547200 Enhancers Fetal Brain Female brain
40 chr10:544200-547600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
41 chr10:544200-547800 Enhancers Cortex derived primary cultured neurospheres brain
42 chr10:544400-545400 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr10:544400-546200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr10:544400-546600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr10:544400-547800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr10:544400-548200 Enhancers Breast Myoepithelial Primary Cells Breast
47 chr10:544600-545200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr10:544600-545200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr10:544600-545200 Enhancers NH-A brain
50 chr10:544600-545400 Weak transcription Fetal Muscle Trunk muscle

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