Variant report

Variant rs12249596
Chromosome Location chr10:593646-593647
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:583200-604800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr10:588400-595200 Weak transcription Psoas Muscle Psoas
3 chr10:590600-596000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
4 chr10:591200-595600 Enhancers Placenta Placenta
5 chr10:591400-595600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr10:591800-594200 Enhancers Placenta Amnion Placenta Amnion
7 chr10:592400-593800 Enhancers Duodenum Mucosa Duodenum
8 chr10:592400-594000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr10:592400-594000 Enhancers Brain Angular Gyrus brain
10 chr10:592400-594000 Enhancers Stomach Mucosa stomach
11 chr10:592400-594000 Enhancers Stomach Smooth Muscle stomach
12 chr10:592400-594200 Enhancers Fetal Brain Female brain
13 chr10:592400-594200 Enhancers Skeletal Muscle Male skeletal muscle
14 chr10:592400-594600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
15 chr10:592400-594600 Enhancers Pancreas Pancrea
16 chr10:592400-595400 Enhancers Fetal Lung lung
17 chr10:592400-596000 Enhancers Brain Anterior Caudate brain
18 chr10:592600-594000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr10:592600-594000 Enhancers HUES48 Cell Line embryonic stem cell
20 chr10:592600-594000 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr10:592600-595200 Enhancers iPS-20b Cell Line embryonic stem cell
22 chr10:592600-595400 Enhancers H1 Cell Line embryonic stem cell
23 chr10:592600-595400 Enhancers Brain Hippocampus Middle brain
24 chr10:592600-595600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr10:592600-595600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
26 chr10:592800-594000 Enhancers HUES64 Cell Line embryonic stem cell
27 chr10:592800-594200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr10:592800-595600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr10:592800-596200 Enhancers Brain Cingulate Gyrus brain
30 chr10:592800-596200 Enhancers Brain Inferior Temporal Lobe brain
31 chr10:593000-593800 Enhancers ES-WA7 Cell Line embryonic stem cell
32 chr10:593000-593800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
33 chr10:593000-594000 Enhancers Cortex derived primary cultured neurospheres brain
34 chr10:593000-594000 Enhancers Brain Substantia Nigra brain
35 chr10:593000-594000 Enhancers Colon Smooth Muscle Colon
36 chr10:593000-594000 Enhancers Fetal Muscle Leg muscle
37 chr10:593000-594000 Enhancers Fetal Stomach stomach
38 chr10:593000-594000 Enhancers Rectal Smooth Muscle rectum
39 chr10:593000-594600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
40 chr10:593000-594600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr10:593000-594600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
42 chr10:593000-594600 Enhancers Lung lung
43 chr10:593000-594800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr10:593000-594800 Enhancers HUES6 Cell Line embryonic stem cell
45 chr10:593000-594800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
46 chr10:593000-594800 Enhancers Fetal Muscle Trunk muscle
47 chr10:593000-595600 Enhancers Left Ventricle heart
48 chr10:593000-596000 Enhancers Fetal Brain Male brain
49 chr10:593200-593800 Enhancers Adipose Nuclei Adipose
50 chr10:593200-594000 Enhancers ES-I3 Cell Line embryonic stem cell

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