Variant report
| Variant | rs12250480 |
|---|---|
| Chromosome Location | chr10:96203643-96203644 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:96188400-96213600 | Weak transcription | Stomach Mucosa | stomach |
| 2 | chr10:96190800-96234600 | Weak transcription | Osteobl | bone |
| 3 | chr10:96192000-96211400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 4 | chr10:96198400-96218200 | Weak transcription | Aorta | Aorta |
| 5 | chr10:96199200-96211200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 6 | chr10:96199200-96215400 | Weak transcription | Fetal Stomach | stomach |
| 7 | chr10:96199400-96204000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 8 | chr10:96199400-96204000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 9 | chr10:96199400-96207000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 10 | chr10:96199400-96211200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 11 | chr10:96199400-96211400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 12 | chr10:96199400-96211400 | Weak transcription | Psoas Muscle | Psoas |
| 13 | chr10:96199400-96212000 | Weak transcription | Adipose Nuclei | Adipose |
| 14 | chr10:96199400-96215200 | Weak transcription | Placenta | Placenta |
| 15 | chr10:96199400-96219600 | Weak transcription | Pancreas | Pancrea |
| 16 | chr10:96200200-96211400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 17 | chr10:96200200-96219400 | Weak transcription | Left Ventricle | heart |
| 18 | chr10:96200600-96211200 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 19 | chr10:96201200-96219200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 20 | chr10:96201600-96203800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 21 | chr10:96202400-96210000 | Weak transcription | Fetal Lung | lung |
| 22 | chr10:96202800-96203800 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 23 | chr10:96202800-96203800 | Enhancers | Brain Substantia Nigra | brain |
| 24 | chr10:96202800-96203800 | Strong transcription | HepG2 | liver |
| 25 | chr10:96202800-96203800 | Enhancers | NHDF-Ad | bronchial |
| 26 | chr10:96202800-96204000 | Weak transcription | Fetal Kidney | kidney |
| 27 | chr10:96202800-96204200 | Enhancers | Brain Anterior Caudate | brain |
| 28 | chr10:96203000-96205400 | Weak transcription | HSMMtube | muscle |
| 29 | chr10:96203000-96205600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 30 | chr10:96203000-96218600 | Weak transcription | Ovary | ovary |
| 31 | chr10:96203000-96239600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 32 | chr10:96203200-96215400 | Weak transcription | Fetal Intestine Small | intestine |
| 33 | chr10:96203400-96203800 | Enhancers | Duodenum Smooth Muscle | Duodenum |
| 34 | chr10:96203400-96204200 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 35 | chr10:96203400-96212000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 36 | chr10:96203400-96242800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 37 | chr10:96203600-96203800 | Enhancers | Brain Angular Gyrus | brain |
| 38 | chr10:96203600-96204000 | Enhancers | Liver | Liver |
| 39 | chr10:96203600-96204200 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 40 | chr10:96203600-96205800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 41 | chr10:96203600-96205800 | Weak transcription | HSMM | muscle |
| 42 | chr10:96203600-96206600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 43 | chr10:96203600-96211400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 44 | chr10:96203600-96218400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
