The 2.0 version of rSNPBase

Variant report

Variant rs1225478
Chromosome Location chr11:77039926-77039927
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:77027400-77043000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr11:77027600-77043000 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr11:77028000-77068400 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr11:77028200-77066000 Weak transcription Fetal Kidney kidney
5 chr11:77028400-77043000 Weak transcription Fetal Lung lung
6 chr11:77030400-77043000 Weak transcription Colon Smooth Muscle Colon
7 chr11:77030600-77086800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr11:77030800-77046800 Weak transcription Small Intestine intestine
9 chr11:77030800-77054200 Weak transcription Placenta Amnion Placenta Amnion
10 chr11:77031200-77043000 Weak transcription Colonic Mucosa Colon
11 chr11:77031600-77046600 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr11:77031600-77066400 Weak transcription Gastric stomach
13 chr11:77031600-77073800 Weak transcription Spleen Spleen
14 chr11:77031800-77070400 Weak transcription Fetal Brain Male brain
15 chr11:77032200-77066400 Weak transcription Lung lung
16 chr11:77032400-77043000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr11:77032600-77043200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr11:77032600-77046200 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr11:77033400-77067200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr11:77033400-77090400 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr11:77033600-77046800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr11:77033800-77043000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr11:77033800-77043000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr11:77033800-77043000 Weak transcription Esophagus oesophagus
25 chr11:77033800-77043000 Weak transcription NHEK skin
26 chr11:77033800-77045200 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr11:77033800-77059200 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr11:77034000-77043000 Weak transcription Brain Germinal Matrix brain
29 chr11:77034000-77043000 Weak transcription Fetal Muscle Trunk muscle
30 chr11:77034400-77042600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr11:77034400-77042800 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr11:77034400-77043000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr11:77034400-77043000 Weak transcription Muscle Satellite Cultured Cells --
34 chr11:77034400-77043000 Weak transcription Aorta Aorta
35 chr11:77034400-77043000 Weak transcription Ovary ovary
36 chr11:77034400-77043000 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr11:77034400-77043000 Weak transcription Thymus Thymus
38 chr11:77034400-77043000 Weak transcription NHDF-Ad bronchial
39 chr11:77034400-77043400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr11:77034400-77043400 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr11:77034400-77044600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr11:77034400-77045000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr11:77034400-77047000 Weak transcription Left Ventricle heart
44 chr11:77034400-77054600 Weak transcription Pancreas Pancrea
45 chr11:77034400-77059200 Weak transcription Psoas Muscle Psoas
46 chr11:77034400-77086200 Weak transcription NHLF lung
47 chr11:77034600-77042800 Weak transcription Fetal Thymus thymus
48 chr11:77034600-77043000 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr11:77034600-77043000 Weak transcription NH-A brain
50 chr11:77034600-77043600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015