Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:21665558..21668066-chr10:21668270..21670229,2	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10047401	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs10466076	0.87[AMR][1000 genomes]
rs10466077	0.87[AMR][1000 genomes]
rs10466079	0.87[AMR][1000 genomes]
rs11012675	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11012678	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs11012682	0.99[AFR][1000 genomes]
rs11012684	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11012685	0.87[AMR][1000 genomes]
rs12241226	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12243488	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12251668	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12265937	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16921775	0.92[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28870418	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7071159	0.87[AMR][1000 genomes]
rs7075558	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7084081	1.00[AMR][1000 genomes]
rs7084932	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7092377	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7093106	0.87[AMR][1000 genomes]
rs7097605	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7902413	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7904105	0.87[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530148	chr10:21065080-21724565	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
2	nsv831807	chr10:21509185-21688043	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:21654000-21676800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr10:21654200-21681400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr10:21666200-21672200	Weak transcription	A549	lung
4	chr10:21668800-21674400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr10:21669200-21670200	Enhancers	Primary T cells from cord blood	blood

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