Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10786253	0.97[ASN][1000 genomes]
rs10882691	1.00[ASN][1000 genomes]
rs10882692	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs10882695	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10882696	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10882700	1.00[CHB][hapmap];0.89[JPT][hapmap];0.90[ASN][1000 genomes]
rs11188527	1.00[ASN][1000 genomes]
rs11188529	1.00[CHB][hapmap];0.85[JPT][hapmap];0.92[ASN][1000 genomes]
rs11527888	1.00[ASN][1000 genomes]
rs11528101	1.00[ASN][1000 genomes]
rs11528102	0.96[ASN][1000 genomes]
rs12221469	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12244228	1.00[ASN][1000 genomes]
rs1360955	0.93[JPT][hapmap];0.85[YRI][hapmap]
rs4290160	0.92[JPT][hapmap]
rs4917718	0.92[JPT][hapmap];0.89[YRI][hapmap]
rs7893334	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7903617	0.93[JPT][hapmap];0.86[YRI][hapmap]
rs7905861	0.92[JPT][hapmap]
rs7909949	1.00[ASN][1000 genomes]
rs7922059	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7922216	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531923	chr10:97366055-97725757	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	nsv895906	chr10:97513362-97703650	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
3	nsv895908	chr10:97544513-97724247	Enhancers Active TSS Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97702200-97703000	Enhancers	Primary hematopoietic stem cells	blood
2	chr10:97702400-97703000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr10:97702600-97703200	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr10:97702600-97703200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr10:97702800-97703000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr10:97702800-97703200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr10:97702800-97703200	Active TSS	Osteobl	bone

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