Variant report

Variant rs12280876
Chromosome Location chr11:73035563-73035564
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:73024400-73037000 Enhancers Placenta Placenta
2 chr11:73024800-73037000 Genic enhancers Fetal Intestine Small intestine
3 chr11:73025400-73037200 Enhancers Left Ventricle heart
4 chr11:73025800-73038400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
5 chr11:73026400-73036800 Enhancers Fetal Heart heart
6 chr11:73026600-73039600 Genic enhancers Fetal Stomach stomach
7 chr11:73028400-73039000 Enhancers Rectal Smooth Muscle rectum
8 chr11:73028600-73037000 Enhancers Right Ventricle heart
9 chr11:73030400-73036200 Enhancers Lung lung
10 chr11:73030600-73037000 Enhancers Ovary ovary
11 chr11:73030800-73036800 Enhancers Primary hematopoietic stem cells blood
12 chr11:73030800-73037000 Enhancers Esophagus oesophagus
13 chr11:73030800-73039000 Enhancers Fetal Lung lung
14 chr11:73030800-73040000 Enhancers Right Atrium heart
15 chr11:73031000-73037200 Enhancers Colonic Mucosa Colon
16 chr11:73031200-73035600 Enhancers HMEC breast
17 chr11:73031200-73037000 Enhancers NHDF-Ad bronchial
18 chr11:73031400-73036000 Enhancers NH-A brain
19 chr11:73031400-73036600 Enhancers Fetal Muscle Trunk muscle
20 chr11:73031600-73036600 Flanking Active TSS Stomach Smooth Muscle stomach
21 chr11:73031800-73035600 Enhancers HSMMtube muscle
22 chr11:73031800-73035800 Enhancers HUVEC blood vessel
23 chr11:73031800-73036000 Enhancers Brain Anterior Caudate brain
24 chr11:73031800-73036400 Enhancers Duodenum Mucosa Duodenum
25 chr11:73031800-73036600 Enhancers Rectal Mucosa Donor 31 rectum
26 chr11:73031800-73037000 Enhancers Skeletal Muscle Female skeletal muscle
27 chr11:73031800-73037000 Enhancers Spleen Spleen
28 chr11:73031800-73038800 Enhancers Brain Inferior Temporal Lobe brain
29 chr11:73031800-73042200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr11:73032000-73036000 Enhancers Brain Cingulate Gyrus brain
31 chr11:73032000-73037400 Enhancers Brain Hippocampus Middle brain
32 chr11:73032200-73035600 Enhancers Fetal Thymus thymus
33 chr11:73032200-73036600 Enhancers Fetal Kidney kidney
34 chr11:73032200-73036800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr11:73032200-73036800 Enhancers Stomach Mucosa stomach
36 chr11:73032400-73035600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
37 chr11:73032400-73038000 Weak transcription NHEK skin
38 chr11:73032600-73036000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
39 chr11:73032600-73039000 Enhancers Brain Substantia Nigra brain
40 chr11:73033000-73036800 Enhancers ES-I3 Cell Line embryonic stem cell
41 chr11:73033200-73036200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
42 chr11:73033200-73036600 Enhancers Primary hematopoietic stem cells short term culture blood
43 chr11:73033200-73045400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr11:73033200-73045600 Weak transcription Monocytes-CD14+_RO01746 blood
45 chr11:73033400-73035600 Enhancers Gastric stomach
46 chr11:73033400-73036600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr11:73033600-73035600 Enhancers GM12878-XiMat blood
48 chr11:73033600-73036400 Enhancers Breast Myoepithelial Primary Cells Breast
49 chr11:73033800-73036600 Bivalent Enhancer H1 Cell Line embryonic stem cell
50 chr11:73033800-73036800 Enhancers HUES64 Cell Line embryonic stem cell

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