Variant report

Variant	rs12281908
Chromosome Location	chr11:121805262-121805263
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10219348	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10892786	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11218457	0.85[EUR][1000 genomes]
rs11218458	0.85[EUR][1000 genomes]
rs11218466	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11218476	0.97[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11218477	0.95[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs1219419	0.85[EUR][1000 genomes]
rs12271581	0.85[EUR][1000 genomes]
rs12281134	0.85[EUR][1000 genomes]
rs12290901	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12294692	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3953235	0.85[EUR][1000 genomes]
rs59708244	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7925712	0.84[EUR][1000 genomes]
rs7926019	0.84[EUR][1000 genomes]
rs7926154	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7939651	0.85[EUR][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121801400-121805400	Weak transcription	HSMMtube	muscle
2	chr11:121801400-121813000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:121801600-121807000	Weak transcription	Psoas Muscle	Psoas
4	chr11:121801600-121807000	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr11:121801600-121807000	Weak transcription	NH-A	brain
6	chr11:121801600-121807200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr11:121803000-121806400	Weak transcription	Osteobl	bone
8	chr11:121803000-121806800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr11:121803200-121806600	Weak transcription	NHLF	lung
10	chr11:121803600-121805800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr11:121803600-121806000	Weak transcription	NHDF-Ad	bronchial
12	chr11:121803600-121807200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr11:121803800-121807400	Weak transcription	Liver	Liver
14	chr11:121804000-121806400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr11:121804000-121806600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr11:121804000-121808800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr11:121804200-121807000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr11:121804400-121805800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr11:121804400-121805800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr11:121804400-121807000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr11:121804800-121805800	Weak transcription	Muscle Satellite Cultured Cells	--
22	chr11:121804800-121807200	Weak transcription	HepG2	liver

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