Variant report

Variant rs12290857
Chromosome Location chr11:108431832-108431833
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:108417200-108441400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr11:108422400-108441600 Weak transcription Duodenum Mucosa Duodenum
3 chr11:108423000-108436000 Weak transcription Fetal Intestine Small intestine
4 chr11:108423400-108432200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr11:108423400-108432400 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr11:108423400-108436000 Weak transcription Liver Liver
7 chr11:108423600-108441400 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr11:108423800-108432200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr11:108424200-108439400 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr11:108426400-108432600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr11:108427800-108432200 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr11:108428600-108442000 Weak transcription K562 blood
13 chr11:108429000-108432400 Enhancers HSMMtube muscle
14 chr11:108429200-108434600 Enhancers HSMM muscle
15 chr11:108429600-108432200 Weak transcription Aorta Aorta
16 chr11:108430000-108432400 Enhancers NH-A brain
17 chr11:108430400-108432200 Weak transcription Placenta Amnion Placenta Amnion
18 chr11:108430400-108432600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr11:108430400-108436600 Weak transcription Brain Hippocampus Middle brain
20 chr11:108430600-108432200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr11:108430800-108432200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr11:108430800-108432400 Enhancers NHDF-Ad bronchial
23 chr11:108430800-108433400 Weak transcription GM12878-XiMat blood
24 chr11:108431000-108432200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr11:108431000-108432200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr11:108431000-108432200 Weak transcription Ovary ovary
27 chr11:108431000-108433200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr11:108431000-108434000 Weak transcription Gastric stomach
29 chr11:108431000-108434400 Enhancers Osteobl bone
30 chr11:108431000-108434600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
31 chr11:108431000-108436200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr11:108431200-108432200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr11:108431200-108432200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr11:108431200-108432200 Weak transcription Adipose Nuclei Adipose
35 chr11:108431200-108432200 Weak transcription Fetal Lung lung
36 chr11:108431200-108432200 Weak transcription HMEC breast
37 chr11:108431200-108434400 Enhancers Muscle Satellite Cultured Cells --
38 chr11:108431400-108432200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr11:108431400-108432200 Weak transcription Placenta Placenta
40 chr11:108431400-108432400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr11:108431400-108432400 Enhancers NHLF lung
42 chr11:108431400-108433200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr11:108431600-108432000 Weak transcription Fetal Kidney kidney
44 chr11:108431800-108432200 Strong transcription NHEK skin

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