Variant report

Variant	rs12291376
Chromosome Location	chr11:76556720-76556721
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs1225129	0.82[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs1225131	0.83[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs1225132	0.83[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs1225133	0.94[ASN][1000 genomes]
rs1225134	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1225135	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1225136	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1225137	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1225140	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1225141	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1225144	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1225147	0.93[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1225149	0.80[ASN][1000 genomes]
rs1235157	0.83[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs1372045	0.88[ASN][1000 genomes]
rs2119455	0.88[ASN][1000 genomes]
rs894065	0.90[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs920512	0.90[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76549600-76561000	Weak transcription	Right Atrium	heart
2	chr11:76549600-76570800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr11:76549800-76572000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr11:76550600-76566400	Weak transcription	Lung	lung
5	chr11:76551600-76558400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr11:76553400-76560400	Weak transcription	K562	blood
7	chr11:76555200-76556800	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr11:76556000-76557400	Weak transcription	Rectal Mucosa Donor 31	rectum
9	chr11:76556400-76558200	Weak transcription	Monocytes-CD14+_RO01746	blood
10	chr11:76556400-76561600	Weak transcription	Liver	Liver
11	chr11:76556600-76556800	Enhancers	Sigmoid Colon	Sigmoid Colon

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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