Variant report

Variant	rs12291756
Chromosome Location	chr11:33797814-33797815
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2)
CpG islands
(count:0)
Chromatin interactive
region (count:2)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	JUND	chr11:33797106-33797847	GM12878	blood:	n/a	n/a
2	EP300	chr11:33797401-33797856	GM12878	blood:	n/a	n/a

No data

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:33756399..33761777-chr11:33794455..33799644,9	K562	blood:
2	chr11:33756496..33759717-chr11:33794342..33798618,4	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AC132216.1-3	chr11:33797734-33797886	ENSG00000255272.1

No data

Variant related genes	Relation type
FBXO3	TF binding region
ENSG00000085063	Chromatin interaction

rs_ID	r²[population]
rs10836112	1.00[GIH][hapmap];1.00[ASN][1000 genomes]
rs11825259	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11828443	1.00[MEX][hapmap]
rs11828494	1.00[MEX][hapmap]
rs12275719	1.00[ASN][1000 genomes]
rs12280748	1.00[ASN][1000 genomes]
rs12283466	0.88[AFR][1000 genomes]
rs16924647	1.00[ASN][1000 genomes]
rs16924660	1.00[ASN][1000 genomes]
rs16924667	1.00[ASN][1000 genomes]
rs16924765	1.00[ASN][1000 genomes]
rs58573455	1.00[AMR][1000 genomes]
rs60565360	1.00[ASN][1000 genomes]
rs6484659	1.00[MEX][hapmap]
rs7115000	1.00[MEX][hapmap]
rs7121697	1.00[MEX][hapmap]

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33796400-33798200	Flanking Active TSS	GM12878-XiMat	blood
2	chr11:33796800-33799800	Weak transcription	Right Atrium	heart
3	chr11:33796800-33799800	Weak transcription	Right Ventricle	heart
4	chr11:33797000-33798000	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr11:33797000-33798000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr11:33797000-33798000	Enhancers	NHEK	skin
7	chr11:33797000-33798000	Enhancers	NHLF	lung
8	chr11:33797000-33799600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr11:33797000-33799800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr11:33797000-33799800	Weak transcription	Fetal Brain Female	brain
11	chr11:33797200-33798000	Enhancers	Duodenum Smooth Muscle	Duodenum
12	chr11:33797200-33798000	Bivalent Enhancer	Rectal Mucosa Donor 29	rectum
13	chr11:33797200-33798000	Enhancers	Stomach Smooth Muscle	stomach
14	chr11:33797200-33798200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr11:33797200-33798200	Enhancers	Colon Smooth Muscle	Colon
16	chr11:33797200-33799400	Weak transcription	Brain Germinal Matrix	brain
17	chr11:33797200-33799800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr11:33797200-33799800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr11:33797200-33799800	Weak transcription	Left Ventricle	heart
20	chr11:33797200-33800000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr11:33797200-33800800	Weak transcription	Placenta Amnion	Placenta Amnion
22	chr11:33797200-33801600	Weak transcription	Aorta	Aorta
23	chr11:33797200-33801600	Weak transcription	Ovary	ovary
24	chr11:33797400-33799600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr11:33797400-33800000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
26	chr11:33797600-33799600	Weak transcription	HSMMtube	muscle
27	chr11:33797600-33799600	Weak transcription	NH-A	brain
28	chr11:33797600-33799800	Weak transcription	HSMM	muscle
29	chr11:33797600-33799800	Weak transcription	NHDF-Ad	bronchial
30	chr11:33797600-33801400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr11:33797600-33801400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
32	chr11:33797800-33799600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
33	chr11:33797800-33800000	Weak transcription	Muscle Satellite Cultured Cells	--

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