Variant report

Variant	rs12293121
Chromosome Location	chr11:83629240-83629241
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11233805	1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11233811	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11233813	0.82[CEU][hapmap]
rs12271245	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12283751	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12285761	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12285920	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12287742	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12288941	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs72945801	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72947723	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83608400-83634600	Weak transcription	Brain Hippocampus Middle	brain
2	chr11:83608800-83629400	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr11:83618200-83641200	Weak transcription	Brain Anterior Caudate	brain
4	chr11:83621000-83629400	Weak transcription	Brain Cingulate Gyrus	brain
5	chr11:83623200-83635800	Weak transcription	Brain Substantia Nigra	brain
6	chr11:83624600-83636000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr11:83628800-83630200	Enhancers	Brain Angular Gyrus	brain
8	chr11:83629200-83629800	Enhancers	Stomach Smooth Muscle	stomach
9	chr11:83629200-83630400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr11:83629200-83630600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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