Variant report
| Variant | rs1230664 |
|---|---|
| Chromosome Location | chr1:114182626-114182627 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:114159000-114195000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 2 | chr1:114159200-114194800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 3 | chr1:114161600-114184600 | Weak transcription | Colon Smooth Muscle | Colon |
| 4 | chr1:114161600-114184600 | Weak transcription | HepG2 | liver |
| 5 | chr1:114161800-114199800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 6 | chr1:114162200-114184600 | Weak transcription | Left Ventricle | heart |
| 7 | chr1:114169200-114189400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 8 | chr1:114169400-114184600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 9 | chr1:114170800-114184600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 10 | chr1:114171600-114241400 | Weak transcription | Right Ventricle | heart |
| 11 | chr1:114172400-114184600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 12 | chr1:114172400-114192600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 13 | chr1:114173000-114184600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 14 | chr1:114173000-114184600 | Weak transcription | Adipose Nuclei | Adipose |
| 15 | chr1:114173000-114214400 | Weak transcription | Esophagus | oesophagus |
| 16 | chr1:114173000-114226800 | Weak transcription | Aorta | Aorta |
| 17 | chr1:114173200-114184600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 18 | chr1:114173200-114184600 | Weak transcription | Ovary | ovary |
| 19 | chr1:114173400-114182800 | Weak transcription | Fetal Lung | lung |
| 20 | chr1:114173400-114184600 | Weak transcription | Primary T cells from cord blood | blood |
| 21 | chr1:114173600-114183800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 22 | chr1:114173600-114184600 | Weak transcription | Liver | Liver |
| 23 | chr1:114173600-114195000 | Weak transcription | HMEC | breast |
| 24 | chr1:114173600-114206000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 25 | chr1:114173800-114184600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 26 | chr1:114173800-114184600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 27 | chr1:114173800-114196200 | Weak transcription | Gastric | stomach |
| 28 | chr1:114173800-114199600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 29 | chr1:114173800-114201800 | Weak transcription | Colonic Mucosa | Colon |
| 30 | chr1:114173800-114201800 | Weak transcription | Lung | lung |
| 31 | chr1:114173800-114214400 | Weak transcription | Pancreas | Pancrea |
| 32 | chr1:114173800-114236000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 33 | chr1:114174000-114184600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 34 | chr1:114174000-114184600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 35 | chr1:114179800-114239600 | Weak transcription | Spleen | Spleen |
| 36 | chr1:114180400-114184600 | Weak transcription | Brain Angular Gyrus | brain |
| 37 | chr1:114181000-114182800 | ZNF genes & repeats | Fetal Intestine Small | intestine |
| 38 | chr1:114181200-114199400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 39 | chr1:114181400-114184600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 40 | chr1:114181800-114183400 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 41 | chr1:114181800-114199800 | Weak transcription | Fetal Brain Female | brain |
| 42 | chr1:114182000-114182800 | ZNF genes & repeats | Fetal Adrenal Gland | Adrenal Gland |
| 43 | chr1:114182000-114182800 | ZNF genes & repeats | Fetal Intestine Large | intestine |
| 44 | chr1:114182000-114183000 | ZNF genes & repeats | Fetal Muscle Leg | muscle |
| 45 | chr1:114182000-114184600 | Weak transcription | Brain Substantia Nigra | brain |
| 46 | chr1:114182000-114219600 | Weak transcription | Fetal Kidney | kidney |
| 47 | chr1:114182200-114189200 | Weak transcription | Placenta | Placenta |
| 48 | chr1:114182200-114197600 | Weak transcription | Brain Hippocampus Middle | brain |
| 49 | chr1:114182600-114182800 | Active TSS | Fetal Brain Male | brain |
| 50 | chr1:114182600-114187800 | Weak transcription | Fetal Stomach | stomach |
