Variant report
| Variant | rs1230641 |
|---|---|
| Chromosome Location | chr1:114265963-114265964 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:114203200-114298600 | Weak transcription | Fetal Brain Male | brain |
| 2 | chr1:114216200-114279800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 3 | chr1:114227000-114268200 | Weak transcription | NHLF | lung |
| 4 | chr1:114228000-114287800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 5 | chr1:114236400-114300000 | Weak transcription | Small Intestine | intestine |
| 6 | chr1:114238400-114266800 | Weak transcription | NHEK | skin |
| 7 | chr1:114239200-114279800 | Weak transcription | Colon Smooth Muscle | Colon |
| 8 | chr1:114240200-114279400 | Weak transcription | Psoas Muscle | Psoas |
| 9 | chr1:114242000-114300000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 10 | chr1:114242800-114269800 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 11 | chr1:114245400-114270800 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 12 | chr1:114245400-114275000 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 13 | chr1:114245600-114300600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 14 | chr1:114248800-114290200 | Weak transcription | HMEC | breast |
| 15 | chr1:114251000-114291400 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 16 | chr1:114253000-114279400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 17 | chr1:114253000-114279600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 18 | chr1:114253200-114266800 | Weak transcription | HSMM | muscle |
| 19 | chr1:114253400-114266800 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 20 | chr1:114254000-114272200 | Weak transcription | HSMMtube | muscle |
| 21 | chr1:114254600-114277000 | Weak transcription | Adipose Nuclei | Adipose |
| 22 | chr1:114254800-114266400 | Weak transcription | NHDF-Ad | bronchial |
| 23 | chr1:114254800-114271800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 24 | chr1:114256600-114283600 | Weak transcription | Brain Anterior Caudate | brain |
| 25 | chr1:114256600-114288800 | Weak transcription | K562 | blood |
| 26 | chr1:114256800-114277200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 27 | chr1:114257600-114283000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 28 | chr1:114257600-114296200 | Weak transcription | Pancreas | Pancrea |
| 29 | chr1:114258000-114267200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 30 | chr1:114258000-114300000 | Weak transcription | Right Ventricle | heart |
| 31 | chr1:114261000-114269200 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 32 | chr1:114261400-114267600 | Weak transcription | A549 | lung |
| 33 | chr1:114261400-114271400 | Weak transcription | Thymus | Thymus |
| 34 | chr1:114261400-114277200 | Weak transcription | HepG2 | liver |
| 35 | chr1:114261400-114279000 | Weak transcription | Spleen | Spleen |
| 36 | chr1:114261400-114300000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 37 | chr1:114261400-114300600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 38 | chr1:114261400-114301000 | Weak transcription | Lung | lung |
| 39 | chr1:114261600-114266800 | Weak transcription | Left Ventricle | heart |
| 40 | chr1:114261600-114268200 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 41 | chr1:114261600-114269200 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 42 | chr1:114261600-114272200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 43 | chr1:114261600-114280200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 44 | chr1:114261600-114300200 | Weak transcription | Brain Angular Gyrus | brain |
| 45 | chr1:114261600-114300600 | Weak transcription | Aorta | Aorta |
| 46 | chr1:114261600-114300600 | Weak transcription | Esophagus | oesophagus |
| 47 | chr1:114261600-114300600 | Weak transcription | Gastric | stomach |
| 48 | chr1:114261800-114266800 | Weak transcription | Ovary | ovary |
| 49 | chr1:114262000-114272000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 50 | chr1:114262000-114286400 | Weak transcription | Brain Hippocampus Middle | brain |
