Variant report
| Variant | rs12307769 |
|---|---|
| Chromosome Location | chr12:49158490-49158491 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:49134600-49161800 | Weak transcription | A549 | lung |
| 2 | chr12:49144800-49159400 | Weak transcription | HSMMtube | muscle |
| 3 | chr12:49145400-49158600 | Weak transcription | Gastric | stomach |
| 4 | chr12:49150600-49160200 | Weak transcription | Right Atrium | heart |
| 5 | chr12:49152200-49159400 | Weak transcription | Lung | lung |
| 6 | chr12:49152400-49158600 | Weak transcription | Fetal Intestine Large | intestine |
| 7 | chr12:49152600-49158600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 8 | chr12:49152800-49161600 | Weak transcription | Aorta | Aorta |
| 9 | chr12:49153000-49160200 | Weak transcription | Fetal Lung | lung |
| 10 | chr12:49153200-49158600 | Weak transcription | Fetal Heart | heart |
| 11 | chr12:49153600-49158800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 12 | chr12:49155000-49159400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 13 | chr12:49155800-49159200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 14 | chr12:49156000-49158600 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 15 | chr12:49156400-49158800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 16 | chr12:49156600-49159200 | Weak transcription | Fetal Brain Female | brain |
| 17 | chr12:49156800-49158600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 18 | chr12:49156800-49158800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 19 | chr12:49156800-49164400 | Weak transcription | Fetal Kidney | kidney |
| 20 | chr12:49157000-49158600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 21 | chr12:49157000-49158600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 22 | chr12:49157000-49159600 | Weak transcription | Brain Germinal Matrix | brain |
| 23 | chr12:49157000-49159600 | Weak transcription | NH-A | brain |
| 24 | chr12:49157000-49160400 | Weak transcription | Colon Smooth Muscle | Colon |
| 25 | chr12:49157000-49161000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 26 | chr12:49157000-49161800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 27 | chr12:49157000-49164400 | Weak transcription | HUVEC | blood vessel |
| 28 | chr12:49157200-49158800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 29 | chr12:49157200-49159000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 30 | chr12:49157200-49159400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 31 | chr12:49157200-49159600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 32 | chr12:49157200-49160600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 33 | chr12:49157400-49159000 | Weak transcription | Liver | Liver |
| 34 | chr12:49157400-49159000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 35 | chr12:49157400-49159000 | Weak transcription | Pancreas | Pancrea |
| 36 | chr12:49157400-49160800 | Weak transcription | HepG2 | liver |
| 37 | chr12:49157600-49159400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 38 | chr12:49157600-49161600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 39 | chr12:49157800-49161800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 40 | chr12:49158000-49160200 | Weak transcription | Brain Hippocampus Middle | brain |
| 41 | chr12:49158200-49158600 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 42 | chr12:49158200-49158600 | Genic enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 43 | chr12:49158200-49158600 | Enhancers | Rectal Mucosa Donor 29 | rectum |
| 44 | chr12:49158200-49158600 | Enhancers | NHEK | skin |
| 45 | chr12:49158200-49158800 | Enhancers | Hela-S3 | cervix |
| 46 | chr12:49158200-49158800 | Enhancers | HMEC | breast |
| 47 | chr12:49158200-49159000 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 48 | chr12:49158200-49159000 | Enhancers | Stomach Mucosa | stomach |
| 49 | chr12:49158200-49159600 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 50 | chr12:49158200-49159800 | Strong transcription | Adipose Nuclei | Adipose |
