The 2.0 version of rSNPBase

Variant report

Variant rs12328593
Chromosome Location chr2:180052253-180052254
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:179980000-180056800 Weak transcription HSMM muscle
2 chr2:179998000-180060600 Weak transcription Right Ventricle heart
3 chr2:180005800-180053600 Weak transcription Primary T cells from cord blood blood
4 chr2:180006800-180054600 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr2:180015000-180054800 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr2:180015000-180056000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr2:180015000-180060600 Weak transcription Lung lung
8 chr2:180015400-180058000 Weak transcription Fetal Stomach stomach
9 chr2:180015400-180060600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr2:180016000-180054200 Weak transcription NHDF-Ad bronchial
11 chr2:180016200-180054000 Weak transcription Osteobl bone
12 chr2:180023000-180052800 Weak transcription Fetal Heart heart
13 chr2:180030400-180055400 Weak transcription Thymus Thymus
14 chr2:180032200-180067600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr2:180036600-180053200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr2:180037600-180058800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr2:180041000-180054800 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr2:180041000-180057000 Weak transcription Primary neutrophils fromperipheralblood blood
19 chr2:180041200-180053200 Weak transcription Brain Anterior Caudate brain
20 chr2:180041200-180056000 Weak transcription Fetal Thymus thymus
21 chr2:180041200-180058800 Weak transcription Left Ventricle heart
22 chr2:180041200-180058800 Weak transcription Ovary ovary
23 chr2:180043000-180053200 Weak transcription Brain Substantia Nigra brain
24 chr2:180043200-180055200 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr2:180043400-180052600 Weak transcription Brain Angular Gyrus brain
26 chr2:180043600-180058800 Weak transcription Gastric stomach
27 chr2:180044600-180054800 Weak transcription Fetal Lung lung
28 chr2:180045000-180054800 Weak transcription Fetal Kidney kidney
29 chr2:180046000-180054200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr2:180046000-180057600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr2:180046200-180053200 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr2:180046200-180053400 Weak transcription Brain Inferior Temporal Lobe brain
33 chr2:180046200-180054400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr2:180046200-180054600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr2:180046400-180053200 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr2:180046400-180053600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr2:180046400-180053800 Weak transcription Adipose Nuclei Adipose
38 chr2:180046400-180061000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr2:180047000-180054600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr2:180047800-180052400 Weak transcription Primary B cells from peripheral blood blood
41 chr2:180047800-180052600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr2:180047800-180054000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr2:180048000-180053000 Weak transcription Primary monocytes fromperipheralblood blood
44 chr2:180049200-180052600 Weak transcription HepG2 liver
45 chr2:180049600-180052600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr2:180049600-180053800 Weak transcription Small Intestine intestine
47 chr2:180049800-180054800 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr2:180050000-180052400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr2:180051400-180054400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr2:180051400-180057400 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015