The 2.0 version of rSNPBase

Variant report

Variant rs12336425
Chromosome Location chr9:26937935-26937936
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:26905400-26938200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr9:26916800-26945200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr9:26925800-26945200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr9:26926000-26945200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr9:26926000-26945200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr9:26926000-26945400 Weak transcription HSMMtube muscle
7 chr9:26926600-26941600 Weak transcription HepG2 liver
8 chr9:26926600-26944200 Weak transcription NHEK skin
9 chr9:26926600-26945600 Weak transcription Fetal Kidney kidney
10 chr9:26927400-26943800 Weak transcription Pancreas Pancrea
11 chr9:26927400-26945600 Weak transcription Fetal Thymus thymus
12 chr9:26927800-26945600 Weak transcription Colonic Mucosa Colon
13 chr9:26928400-26938000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr9:26928400-26940200 Weak transcription HUVEC blood vessel
15 chr9:26928400-26941000 Weak transcription Thymus Thymus
16 chr9:26928400-26945200 Weak transcription Muscle Satellite Cultured Cells --
17 chr9:26928400-26945400 Weak transcription NH-A brain
18 chr9:26928600-26938200 Weak transcription NHDF-Ad bronchial
19 chr9:26928600-26943600 Weak transcription NHLF lung
20 chr9:26928600-26945000 Weak transcription Osteobl bone
21 chr9:26928600-26945600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr9:26928800-26943800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr9:26928800-26944400 Weak transcription Rectal Smooth Muscle rectum
24 chr9:26928800-26944600 Weak transcription HMEC breast
25 chr9:26930200-26940400 Weak transcription Primary T cells from cord blood blood
26 chr9:26932400-26945400 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr9:26932800-26939800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr9:26933000-26940200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr9:26934200-26938600 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr9:26934600-26938200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr9:26934800-26938200 Weak transcription Fetal Stomach stomach
32 chr9:26935200-26938200 Weak transcription Primary monocytes fromperipheralblood blood
33 chr9:26935200-26940000 Weak transcription Hela-S3 cervix
34 chr9:26935200-26943000 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr9:26935200-26945400 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr9:26935400-26938200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr9:26935800-26938000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr9:26936400-26938200 Enhancers Primary T helper naive cells from peripheral blood blood
39 chr9:26936400-26945400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr9:26936600-26939600 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr9:26936600-26944200 Weak transcription Liver Liver
42 chr9:26936800-26938200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr9:26936800-26938200 Weak transcription Psoas Muscle Psoas
44 chr9:26936800-26939600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr9:26936800-26940000 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr9:26936800-26940000 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr9:26936800-26940000 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr9:26936800-26943200 Weak transcription Ovary ovary
49 chr9:26936800-26943200 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr9:26936800-26944000 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015