Variant report
| Variant | rs12340310 |
|---|---|
| Chromosome Location | chr9:110246636-110246637 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr9:110235600-110247600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 2 | chr9:110235800-110248400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 3 | chr9:110236000-110248400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 4 | chr9:110242200-110247400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 5 | chr9:110242800-110247400 | Weak transcription | Placenta | Placenta |
| 6 | chr9:110242800-110249000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 7 | chr9:110243000-110249600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 8 | chr9:110243200-110247200 | Weak transcription | HMEC | breast |
| 9 | chr9:110243200-110247600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 10 | chr9:110243200-110247800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 11 | chr9:110243200-110247800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 12 | chr9:110243200-110248000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 13 | chr9:110243200-110248400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 14 | chr9:110243200-110248800 | Weak transcription | Fetal Lung | lung |
| 15 | chr9:110243400-110247400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 16 | chr9:110243400-110247800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 17 | chr9:110243600-110247200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 18 | chr9:110243600-110247400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 19 | chr9:110243600-110247800 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 20 | chr9:110243600-110247800 | Weak transcription | Esophagus | oesophagus |
| 21 | chr9:110243600-110248000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 22 | chr9:110243800-110247400 | Weak transcription | Psoas Muscle | Psoas |
| 23 | chr9:110243800-110247400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 24 | chr9:110243800-110247600 | Weak transcription | Osteobl | bone |
| 25 | chr9:110244000-110246800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 26 | chr9:110244000-110247000 | Weak transcription | NHEK | skin |
| 27 | chr9:110244000-110247200 | Weak transcription | Hela-S3 | cervix |
| 28 | chr9:110244000-110249200 | Weak transcription | A549 | lung |
| 29 | chr9:110244000-110250400 | Weak transcription | HSMMtube | muscle |
| 30 | chr9:110244200-110248400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 31 | chr9:110245600-110247400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 32 | chr9:110245800-110247000 | Active TSS | Rectal Mucosa Donor 29 | rectum |
| 33 | chr9:110246000-110249000 | Weak transcription | Spleen | Spleen |
| 34 | chr9:110246000-110249800 | Transcr. at gene 5' and 3' | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 35 | chr9:110246200-110246800 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 36 | chr9:110246200-110247000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 37 | chr9:110246200-110247200 | Active TSS | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 38 | chr9:110246200-110247200 | Weak transcription | Stomach Mucosa | stomach |
| 39 | chr9:110246200-110247400 | Active TSS | NHDF-Ad | bronchial |
| 40 | chr9:110246200-110247600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 41 | chr9:110246200-110253800 | Active TSS | Right Atrium | heart |
| 42 | chr9:110246400-110246800 | Transcr. at gene 5' and 3' | Monocytes-CD14+_RO01746 | blood |
| 43 | chr9:110246400-110247000 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 44 | chr9:110246600-110246800 | Flanking Active TSS | Adipose Nuclei | Adipose |
| 45 | chr9:110246600-110246800 | Active TSS | Sigmoid Colon | Sigmoid Colon |
| 46 | chr9:110246600-110247000 | Flanking Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 47 | chr9:110246600-110247400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 48 | chr9:110246600-110247400 | Genic enhancers | Primary monocytes fromperipheralblood | blood |
| 49 | chr9:110246600-110247400 | Active TSS | Rectal Mucosa Donor 31 | rectum |
| 50 | chr9:110246600-110247600 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
