Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr9:110254651-110255006	HepG2	liver:	n/a	chr9:110254832-110254843
2	CEBPB	chr9:110254599-110255056	MCF-7	breast:	n/a	chr9:110254832-110254843
3	CEBPB	chr9:110254565-110255156	A549	lung:	n/a	chr9:110254832-110254843
4	CEBPB	chr9:110254714-110254962	K562	blood:	n/a	chr9:110254832-110254843
5	CEBPB	chr9:110254573-110255186	MCF-7	breast:	n/a	chr9:110254832-110254843
6	CEBPB	chr9:110254696-110255007	H1-hESC	embryonic stem cell:	n/a	chr9:110254832-110254843
7	CEBPB	chr9:110254645-110255028	IMR90	lung:	n/a	chr9:110254832-110254843
8	CEBPB	chr9:110254655-110255018	A549	lung:	n/a	chr9:110254832-110254843
9	CEBPB	chr9:110254623-110255064	A549	lung:	n/a	chr9:110254832-110254843
10	CEBPB	chr9:110254649-110255012	Hela-S3	cervix:	n/a	chr9:110254832-110254843

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:110189538..110195123-chr9:110249494..110254933,10	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RAD23B-5	chr9:110254785-110254970	NONHSAT133878

Variant related genes	Relation type
KLF4	TF binding region
ENSG00000226825	Chromatin interaction

rSNPs within LD-proxies of this variant (count:16)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530948	chr9:109760752-110413602	Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	57 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:110253000-110254800	Enhancers	A549	lung
2	chr9:110253600-110255400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr9:110253600-110255400	Enhancers	Stomach Mucosa	stomach
4	chr9:110253800-110254800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr9:110253800-110255000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr9:110253800-110255400	Enhancers	Rectal Mucosa Donor 31	rectum
7	chr9:110254000-110254800	Enhancers	Stomach Smooth Muscle	stomach
8	chr9:110254000-110254800	Enhancers	Osteobl	bone
9	chr9:110254000-110255000	Enhancers	Hela-S3	cervix
10	chr9:110254000-110255000	Enhancers	NHLF	lung
11	chr9:110254000-110256600	Weak transcription	Duodenum Mucosa	Duodenum
12	chr9:110254000-110257400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr9:110254200-110254800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr9:110254200-110255000	Enhancers	Primary monocytes fromperipheralblood	blood
15	chr9:110254400-110254800	Enhancers	Small Intestine	intestine
16	chr9:110254400-110255400	Enhancers	Monocytes-CD14+_RO01746	blood
17	chr9:110254400-110255600	Enhancers	Fetal Intestine Large	intestine
18	chr9:110254400-110255600	Enhancers	Fetal Intestine Small	intestine
19	chr9:110254600-110255200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr9:110254600-110255400	Enhancers	Esophagus	oesophagus

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