Variant report

Variant	rs12345583
Chromosome Location	chr9:110751151-110751152
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10120991	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10124421	1.00[EUR][1000 genomes]
rs10124568	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10979150	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12002014	1.00[ASN][1000 genomes]
rs12336889	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12338094	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12338152	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12341320	0.83[AFR][1000 genomes]
rs12346973	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12352557	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28625170	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28697269	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56065550	1.00[EUR][1000 genomes]
rs73653695	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73653697	0.83[AFR][1000 genomes]
rs9969748	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:110746000-110751200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr9:110746200-110751200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr9:110746200-110751200	Weak transcription	NHDF-Ad	bronchial
4	chr9:110749600-110757600	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr9:110750000-110751400	Enhancers	Primary neutrophils fromperipheralblood	blood
6	chr9:110750800-110752200	Enhancers	Adipose Nuclei	Adipose
7	chr9:110750800-110752400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr9:110750800-110754800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
9	chr9:110751000-110751200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr9:110751000-110752400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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