Variant report

Variant	rs12394031
Chromosome Location	chrX:57100407-57100408
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10126276	0.92[ASW][hapmap];0.92[LWK][hapmap];0.84[MKK][hapmap];0.95[YRI][hapmap]
rs11091631	0.92[ASW][hapmap];0.92[LWK][hapmap];0.84[MKK][hapmap];0.95[YRI][hapmap]
rs2142768	1.00[YRI][hapmap]
rs2317097	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[YRI][hapmap]
rs5960893	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];0.92[MKK][hapmap];1.00[YRI][hapmap]
rs5960904	0.86[YRI][hapmap]
rs5960905	0.92[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];0.92[MKK][hapmap];0.95[YRI][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:57096400-57117000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
2	chrX:57099800-57108400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links