Variant report

Variant	rs5960893
Chromosome Location	chrX:57096419-57096420
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10126276	0.92[ASW][hapmap];0.91[LWK][hapmap];0.80[MKK][hapmap];0.95[YRI][hapmap]
rs11091631	0.92[ASW][hapmap];0.91[LWK][hapmap];0.81[MKK][hapmap];0.95[YRI][hapmap]
rs12394031	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];0.92[MKK][hapmap];1.00[YRI][hapmap]
rs2142768	1.00[YRI][hapmap]
rs2317097	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]
rs5960904	0.86[YRI][hapmap]
rs5960905	0.92[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];0.88[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:57096400-57117000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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