Variant report

Variant	rs12402472
Chromosome Location	chr1:217021714-217021715
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs1030843	0.88[AMR][1000 genomes]
rs10492952	0.83[CHB][hapmap]
rs10492953	0.83[CHB][hapmap]
rs10779282	0.83[CHB][hapmap]
rs10779283	0.83[CHB][hapmap]
rs11117697	0.83[CHB][hapmap]
rs11117701	0.83[CHB][hapmap]
rs11572556	0.83[CHB][hapmap]
rs11572571	0.83[CHB][hapmap]
rs11572574	0.83[CHB][hapmap]
rs11572578	0.83[CHB][hapmap]
rs11585302	0.83[CHB][hapmap]
rs11807312	0.83[CHB][hapmap]
rs12086903	0.81[CHB][hapmap]
rs12402871	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12410353	0.83[CHB][hapmap]
rs12758273	0.83[CHB][hapmap]
rs12758957	0.90[CHB][hapmap]
rs1370147	0.83[CHB][hapmap]
rs1370148	0.83[CHB][hapmap]
rs1436893	1.00[ASN][1000 genomes]
rs1436894	0.83[CHB][hapmap]
rs1542003	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1561185	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1561186	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17044178	0.83[CHB][hapmap]
rs17044214	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2263103	0.83[CHB][hapmap]
rs2576252	0.83[CHB][hapmap]
rs2576254	0.83[CHB][hapmap]
rs2813680	0.83[CHB][hapmap]
rs2813681	0.83[CHB][hapmap]
rs2813683	0.83[CHB][hapmap]
rs4369291	1.00[JPT][hapmap];0.80[YRI][hapmap]
rs4581330	0.83[CHB][hapmap]
rs4593893	1.00[ASN][1000 genomes]
rs6604648	0.83[CHB][hapmap]
rs6656008	0.83[CHB][hapmap]
rs6656300	0.83[CHB][hapmap]
rs67182716	1.00[ASN][1000 genomes]
rs7513033	0.82[CHB][hapmap]
rs7516551	0.83[CHB][hapmap]
rs7521231	0.83[CHB][hapmap]
rs7532492	0.83[CHB][hapmap]
rs7537081	0.83[CHB][hapmap]
rs7552492	0.83[CHB][hapmap]
rs9787079	1.00[CHB][hapmap];0.93[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:217006000-217038000	Weak transcription	Pancreas	Pancrea
2	chr1:217020600-217022200	Weak transcription	Fetal Intestine Small	intestine
3	chr1:217020800-217022200	Enhancers	Stomach Smooth Muscle	stomach
4	chr1:217020800-217023400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr1:217021200-217023200	Enhancers	Fetal Heart	heart
6	chr1:217021400-217021800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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