Variant report

Variant	rs12412656
Chromosome Location	chr10:89781890-89781891
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs12413500	0.91[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs12414916	1.00[ASW][hapmap];0.89[CHB][hapmap];0.87[LWK][hapmap];0.91[MKK][hapmap];0.81[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12781238	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1414892	0.96[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs2078166	0.96[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs4933464	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4934374	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7069904	1.00[YRI][hapmap]
rs72816127	0.96[AFR][1000 genomes];0.81[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:89758400-89785800	Weak transcription	Aorta	Aorta
2	chr10:89774200-89785600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr10:89781200-89783200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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