Variant report

Variant	rs1414892
Chromosome Location	chr10:89783813-89783814
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10159827	0.86[EUR][1000 genomes]
rs11202635	0.94[EUR][1000 genomes]
rs12240758	0.86[EUR][1000 genomes]
rs12264326	0.94[EUR][1000 genomes]
rs12412656	0.96[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs12413500	0.96[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12414916	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12781238	0.88[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs2078166	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4933464	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4934374	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72816127	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7907255	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:89758400-89785800	Weak transcription	Aorta	Aorta
2	chr10:89774200-89785600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr10:89783200-89787200	Weak transcription	Osteobl	bone
4	chr10:89783200-89792200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links