Variant report

Variant	rs12413195
Chromosome Location	chr10:18470329-18470330
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs12777936	0.83[CEU][hapmap];0.93[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];0.91[JPT][hapmap];0.94[MEX][hapmap];0.81[TSI][hapmap];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16916928	0.89[CEU][hapmap];0.93[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1757205	0.96[ASN][1000 genomes]
rs1757206	0.96[ASN][1000 genomes]
rs1757207	0.89[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs1757210	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1757211	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1779226	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1779227	0.89[CEU][hapmap];0.93[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.96[ASN][1000 genomes]
rs1779228	0.89[CEU][hapmap];0.93[CHB][hapmap];0.83[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];0.90[TSI][hapmap];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1779235	0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1779240	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7067916	0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18467600-18471200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr10:18467600-18471200	Enhancers	Ovary	ovary
3	chr10:18468400-18486000	Weak transcription	Fetal Intestine Large	intestine
4	chr10:18469000-18486000	Weak transcription	Aorta	Aorta
5	chr10:18469200-18486000	Weak transcription	Fetal Intestine Small	intestine
6	chr10:18469400-18470400	Enhancers	Colon Smooth Muscle	Colon
7	chr10:18469400-18474400	Weak transcription	Brain Angular Gyrus	brain
8	chr10:18469400-18479000	Weak transcription	Right Ventricle	heart
9	chr10:18469400-18491200	Weak transcription	Primary hematopoietic stem cells	blood
10	chr10:18469600-18470400	Enhancers	Fetal Heart	heart
11	chr10:18469600-18470800	Weak transcription	Fetal Lung	lung
12	chr10:18469600-18471200	Enhancers	Rectal Smooth Muscle	rectum
13	chr10:18469600-18472200	Enhancers	Stomach Smooth Muscle	stomach
14	chr10:18469600-18472400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
15	chr10:18469600-18473600	Weak transcription	Pancreas	Pancrea
16	chr10:18469600-18474600	Weak transcription	Brain Inferior Temporal Lobe	brain
17	chr10:18469600-18474800	Weak transcription	Brain Substantia Nigra	brain
18	chr10:18469600-18483200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr10:18469600-18486000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr10:18469800-18471000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr10:18469800-18471200	Weak transcription	Cortex derived primary cultured neurospheres	brain
22	chr10:18469800-18479200	Weak transcription	Left Ventricle	heart
23	chr10:18470200-18470800	Weak transcription	Fetal Stomach	stomach
24	chr10:18470200-18473400	Weak transcription	Pancreatic Islets	Pancreatic Islet
25	chr10:18470200-18484000	Weak transcription	Duodenum Smooth Muscle	Duodenum
26	chr10:18470200-18484400	Weak transcription	Right Atrium	heart

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