The 2.0 version of rSNPBase

Variant report

Variant rs12439457
Chromosome Location chr15:58982390-58982391
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:58905000-58983200 Weak transcription Esophagus oesophagus
2 chr15:58923400-58982800 Weak transcription Lung lung
3 chr15:58933000-58987000 Weak transcription Rectal Smooth Muscle rectum
4 chr15:58936200-58991400 Weak transcription HMEC breast
5 chr15:58951200-58987000 Weak transcription NHEK skin
6 chr15:58955200-58988400 Weak transcription Fetal Muscle Trunk muscle
7 chr15:58956600-58984400 Weak transcription Duodenum Mucosa Duodenum
8 chr15:58956600-58984600 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr15:58956600-58987400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr15:58957400-58984400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr15:58957600-58989200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr15:58958800-58989000 Weak transcription Placenta Amnion Placenta Amnion
13 chr15:58960400-58982800 Weak transcription Aorta Aorta
14 chr15:58960400-58989600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr15:58961600-58987200 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr15:58961800-58984600 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr15:58962000-58986800 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr15:58962000-58987200 Weak transcription Fetal Lung lung
19 chr15:58968200-58984000 Weak transcription Brain Germinal Matrix brain
20 chr15:58968400-58987000 Weak transcription Fetal Kidney kidney
21 chr15:58969200-58984200 Weak transcription Fetal Intestine Large intestine
22 chr15:58970600-58987200 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr15:58971200-58982400 Weak transcription Brain Cingulate Gyrus brain
24 chr15:58971400-58982800 Weak transcription Primary B cells from peripheral blood blood
25 chr15:58971400-58982800 Weak transcription Dnd41 blood
26 chr15:58971800-58982800 Weak transcription Primary T cells fromperipheralblood blood
27 chr15:58971800-58984800 Weak transcription NHDF-Ad bronchial
28 chr15:58971800-58986800 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr15:58972000-58986600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr15:58972400-58982800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr15:58972400-58984200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr15:58972600-58983000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr15:58972600-58983000 Weak transcription Spleen Spleen
34 chr15:58972600-58984400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr15:58972600-58984400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr15:58972600-58988400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr15:58972600-58988800 Weak transcription Fetal Stomach stomach
38 chr15:58972600-58989000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr15:58973200-58984600 Weak transcription Primary monocytes fromperipheralblood blood
40 chr15:58973200-58984800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr15:58973600-58982400 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr15:58973600-58984200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr15:58974600-58982400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr15:58974600-58991000 Weak transcription Muscle Satellite Cultured Cells --
45 chr15:58975800-58989200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
46 chr15:58976800-58982800 Weak transcription Psoas Muscle Psoas
47 chr15:58976800-58983200 Weak transcription HSMMtube muscle
48 chr15:58976800-58984200 Weak transcription Fetal Muscle Leg muscle
49 chr15:58976800-58986400 Weak transcription Gastric stomach
50 chr15:58976800-58986600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015